RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 CT83Q5H943 113 aa7.05□□□□□ -1.28
RIF1-202ENST00000414861 KPRPQ5T749 579 aaPredicted RBP7.05□□□□□ -1.28
RIF1-202ENST00000414861 C1orf158Q8N1D5 194 aa7.05□□□□□ -1.28
RIF1-202ENST00000414861 NEU1Q99519 415 aa7.05□□□□□ -1.28
RIF1-202ENST00000414861 TUBA4BQ9H853 241 aa7.05□□□□□ -1.28
RIF1-202ENST00000414861 IL36BQ9NZH7 164 aa7.05□□□□□ -1.28
RIF1-202ENST00000414861 MUC4Q99102 2169 aa7.05□□□□□ -1.28
RIF1-202ENST00000414861 MORN3Q6PF18 240 aaPredicted RBP7.05□□□□□ -1.28
RIF1-202ENST00000414861 CSNK1G2-AS1Q8NCQ2 148 aa7.05□□□□□ -1.28
RIF1-202ENST00000414861 TSKUQ8WUA8 353 aa7.05□□□□□ -1.28
RIF1-202ENST00000414861 TP53TG3Q9ULZ0 132 aa7.05□□□□□ -1.28
RIF1-202ENST00000414861 LOC102724200A0A096LPH7 203 aaPredicted RBP7.04□□□□□ -1.28
RIF1-202ENST00000414861 SMIM27A0A1W2PRY6 76 aa7.04□□□□□ -1.28
RIF1-202ENST00000414861 YPEL4Q96NS1 127 aa7.04□□□□□ -1.28
RIF1-202ENST00000414861 CSTL1Q9H114 145 aa7.04□□□□□ -1.28
RIF1-202ENST00000414861 SMCO4Q9NRQ5 59 aa7.04□□□□□ -1.28
RIF1-202ENST00000414861 ZMAT5Q9UDW3 170 aaKnown RBP7.04□□□□□ -1.28
RIF1-202ENST00000414861 HIGD1CA8MV81 97 aa7.04□□□□□ -1.28
RIF1-202ENST00000414861 A8MWL6 223 aa7.04□□□□□ -1.28
RIF1-202ENST00000414861 GNRH2O43555 120 aa7.04□□□□□ -1.28
RIF1-202ENST00000414861 AMBPP02760 352 aa7.04□□□□□ -1.28
RIF1-202ENST00000414861 TYMSP04818 313 aa7.04□□□□□ -1.28
RIF1-202ENST00000414861 IGHV3OR16-12A0A075B7B8 117 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 IGHV1OR15-1A0A075B7D0 117 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 ELOBQ15370 118 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 TDRG1Q3Y452 100 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 FAM159AQ6UWV7 190 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 NUP35Q8NFH5 326 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 MUC21A0A0G2JKD1 596 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 MUC21A0A140T8X8 626 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 A0A1W2PPQ1 181 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 CXorf65A6NEN9 183 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 SPRY2O43597 315 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 IGLC6P0CF74 106 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 HTN1P15515 57 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 TPPP3Q9BW30 176 aa7.03□□□□□ -1.28
RIF1-202ENST00000414861 TGIF2-C20orf24A0A0A6YYL0 155 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 H3BVH4 76 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 K7EIL1 84 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 SPINK4O60575 86 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 CXCL1P09341 107 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 FRMD6-AS1P0C7T7 363 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 PGLYRP4Q96LB8 373 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 IMMP2LQ96T52 175 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 LINC01587Q99440 93 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 C20orf144Q9BQM9 153 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 C1QTNF4Q9BXJ3 329 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 GFRA4Q9GZZ7 299 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 KIR2DL5BA0A0G2JN68 375 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 KIR2DL5BA0A0G2JPC4 375 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 RNASE3P12724 160 aaKnown RBP7.02□□□□□ -1.29
RIF1-202ENST00000414861 RPS20P60866 119 aaKnown RBP7.02□□□□□ -1.29
RIF1-202ENST00000414861 DEFB135Q30KP9 77 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 KIR2DL5AQ8N109 375 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 KIR2DL5BQ8NHK3 375 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 PYGO2Q9BRQ0 406 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 TMEM208Q9BTX3 173 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 MDFICQ9P1T7 246 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.29
RIF1-202ENST00000414861 IGHV3-16A0A0C4DH30 117 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 XKRY2A2RUG3 117 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 CBY3A6NI87 242 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 A8MZ25 164 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 CTRLP40313 264 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 APOC4P55056 127 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 LYZL1Q6UWQ5 148 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 ZNF705AQ6ZN79 300 aaPredicted RBP7.01□□□□□ -1.29
RIF1-202ENST00000414861 FER1L6-AS1Q8NA97 138 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 TIMM8BQ9Y5J9 83 aaPredicted RBP7.01□□□□□ -1.29
RIF1-202ENST00000414861 FAM231BA6NCW3 169 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 ARMS2P0C7Q2 107 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 AZU1P20160 251 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 S100PP25815 95 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 ASIPP42127 132 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
RIF1-202ENST00000414861 SSTP61278 116 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 KCNIP4Q6PIL6 250 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 TMEM256Q8N2U0 113 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.01□□□□□ -1.29
RIF1-202ENST00000414861 KCNS1Q96KK3 526 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 GOLT1BQ9Y3E0 138 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 TENM3Q9P273 2699 aa7.01□□□□□ -1.29
RIF1-202ENST00000414861 COLCA2A8K830 154 aa7□□□□□ -1.29
RIF1-202ENST00000414861 MRPL54Q6P161 138 aaKnown RBP7□□□□□ -1.29
RIF1-202ENST00000414861 OR10AG1Q8NH19 301 aa7□□□□□ -1.29
RIF1-202ENST00000414861 S100A4P26447 101 aaKnown RBP7□□□□□ -1.29
RIF1-202ENST00000414861 DNLZQ5SXM8 178 aa7□□□□□ -1.29
RIF1-202ENST00000414861 C11orf72Q8NBR9 251 aa7□□□□□ -1.29
RIF1-202ENST00000414861 LINC00467Q9BRT7 94 aa7□□□□□ -1.29
RIF1-202ENST00000414861 TRBV24-1A0A075B6N3 115 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 SNAI2O43623 268 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 SSBP4Q9BWG4 385 aaPredicted RBP6.99□□□□□ -1.29
RIF1-202ENST00000414861 SCRT2Q9NQ03 307 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 TRGV11A0A075B6L2 103 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 OR5AL1P0C617 328 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
RIF1-202ENST00000414861 BTF3L4Q96K17 158 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 C9orf85Q96MD7 179 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 GSN-AS1Q9NRJ2 163 aa6.99□□□□□ -1.29
RIF1-202ENST00000414861 MSRB1Q9NZV6 116 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms