RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 URGCP-MRPS24S4R325 110 aa12.28□□□□□ -0.44
SSB-202ENST00000409333 KPRPQ5T749 579 aaPredicted RBP12.28□□□□□ -0.44
SSB-202ENST00000409333 TSKUQ8WUA8 353 aa12.28□□□□□ -0.44
SSB-202ENST00000409333 GTSF1Q8WW33 167 aa12.28□□□□□ -0.44
SSB-202ENST00000409333 CSTL1Q9H114 145 aa12.28□□□□□ -0.44
SSB-202ENST00000409333 GRIFINA4D1Z8 144 aa12.27□□□□□ -0.45
SSB-202ENST00000409333 A8MWL6 223 aa12.27□□□□□ -0.45
SSB-202ENST00000409333 FAM3BP58499 235 aaPredicted RBP12.27□□□□□ -0.45
SSB-202ENST00000409333 C1orf158Q8N1D5 194 aa12.27□□□□□ -0.45
SSB-202ENST00000409333 NEU1Q99519 415 aa12.27□□□□□ -0.45
SSB-202ENST00000409333 SMIM27A0A1W2PRY6 76 aa12.26□□□□□ -0.45
SSB-202ENST00000409333 FAM159AQ6UWV7 190 aa12.26□□□□□ -0.45
SSB-202ENST00000409333 CSNK1G2-AS1Q8NCQ2 148 aa12.26□□□□□ -0.45
SSB-202ENST00000409333 SMCO4Q9NRQ5 59 aa12.26□□□□□ -0.45
SSB-202ENST00000409333 TP53TG3Q9ULZ0 132 aa12.26□□□□□ -0.45
SSB-202ENST00000409333 MUC4Q99102 2169 aa12.26□□□□□ -0.45
SSB-202ENST00000409333 IGHV1OR15-1A0A075B7D0 117 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 CXorf65A6NEN9 183 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 TYMSP04818 313 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 C20orf144Q9BQM9 153 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 C1QTNF4Q9BXJ3 329 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 IGHV3OR16-12A0A075B7B8 117 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 HIGD1CA8MV81 97 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 GNRH2O43555 120 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 PRM2P04554 102 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 TDRG1Q3Y452 100 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 IMMP2LQ96T52 175 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 LINC01587Q99440 93 aa12.25□□□□□ -0.45
SSB-202ENST00000409333 KIR2DL5BA0A0G2JN68 375 aa12.24□□□□□ -0.45
SSB-202ENST00000409333 KIR2DL5BA0A0G2JPC4 375 aa12.24□□□□□ -0.45
SSB-202ENST00000409333 XKRY2A2RUG3 117 aa12.24□□□□□ -0.45
SSB-202ENST00000409333 HTN1P15515 57 aa12.24□□□□□ -0.45
SSB-202ENST00000409333 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
SSB-202ENST00000409333 KIR2DL5AQ8N109 375 aa12.24□□□□□ -0.45
SSB-202ENST00000409333 KIR2DL5BQ8NHK3 375 aa12.24□□□□□ -0.45
SSB-202ENST00000409333 KCNS1Q96KK3 526 aa12.24□□□□□ -0.45
SSB-202ENST00000409333 TMEM208Q9BTX3 173 aa12.24□□□□□ -0.45
SSB-202ENST00000409333 A0A1W2PPQ1 181 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 A8MZ25 164 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 APOC4P55056 127 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 ELOBQ15370 118 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 KCNIP4Q6PIL6 250 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 NUP35Q8NFH5 326 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 YPEL4Q96NS1 127 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 PYGO2Q9BRQ0 406 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 TPPP3Q9BW30 176 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 GFRA4Q9GZZ7 299 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 NAT8BQ9UHF3 227 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 S100PP25815 95 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 PGLYRP4Q96LB8 373 aa12.23□□□□□ -0.45
SSB-202ENST00000409333 FAM231BA6NCW3 169 aa12.22□□□□□ -0.45
SSB-202ENST00000409333 H3BVH4 76 aa12.22□□□□□ -0.45
SSB-202ENST00000409333 SPINK4O60575 86 aa12.22□□□□□ -0.45
SSB-202ENST00000409333 TMEM256Q8N2U0 113 aa12.22□□□□□ -0.45
SSB-202ENST00000409333 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
SSB-202ENST00000409333 NBEAL2Q6ZNJ1 2754 aa12.21□□□□□ -0.45
SSB-202ENST00000409333 TGIF2-C20orf24A0A0A6YYL0 155 aa12.21□□□□□ -0.45
SSB-202ENST00000409333 CBY3A6NI87 242 aa12.21□□□□□ -0.45
SSB-202ENST00000409333 K7EIL1 84 aa12.21□□□□□ -0.45
SSB-202ENST00000409333 CXCL1P09341 107 aa12.21□□□□□ -0.45
SSB-202ENST00000409333 FRMD6-AS1P0C7T7 363 aa12.21□□□□□ -0.45
SSB-202ENST00000409333 ASIPP42127 132 aa12.21□□□□□ -0.45
SSB-202ENST00000409333 GOLT1BQ9Y3E0 138 aa12.21□□□□□ -0.45
SSB-202ENST00000409333 MUC21A0A0G2JKD1 596 aa12.2□□□□□ -0.46
SSB-202ENST00000409333 MUC21A0A140T8X8 626 aa12.2□□□□□ -0.46
SSB-202ENST00000409333 RNASE3P12724 160 aaKnown RBP12.2□□□□□ -0.46
SSB-202ENST00000409333 FOXA3P55318 350 aaPredicted RBP12.2□□□□□ -0.46
SSB-202ENST00000409333 DEFB135Q30KP9 77 aa12.2□□□□□ -0.46
SSB-202ENST00000409333 LYZL1Q6UWQ5 148 aa12.2□□□□□ -0.46
SSB-202ENST00000409333 ZNF705AQ6ZN79 300 aaPredicted RBP12.2□□□□□ -0.46
SSB-202ENST00000409333 LINC00467Q9BRT7 94 aa12.2□□□□□ -0.46
SSB-202ENST00000409333 MDFICQ9P1T7 246 aa12.2□□□□□ -0.46
SSB-202ENST00000409333 TIMM8BQ9Y5J9 83 aaPredicted RBP12.2□□□□□ -0.46
SSB-202ENST00000409333 IGHV3-16A0A0C4DH30 117 aa12.2□□□□□ -0.46
SSB-202ENST00000409333 SPRY2O43597 315 aa12.2□□□□□ -0.46
SSB-202ENST00000409333 DNLZQ5SXM8 178 aa12.2□□□□□ -0.46
SSB-202ENST00000409333 ARMS2P0C7Q2 107 aa12.19□□□□□ -0.46
SSB-202ENST00000409333 AZU1P20160 251 aa12.19□□□□□ -0.46
SSB-202ENST00000409333 S100A4P26447 101 aaKnown RBP12.19□□□□□ -0.46
SSB-202ENST00000409333 CTRLP40313 264 aa12.19□□□□□ -0.46
SSB-202ENST00000409333 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
SSB-202ENST00000409333 SSTP61278 116 aa12.18□□□□□ -0.46
SSB-202ENST00000409333 MRPL54Q6P161 138 aaKnown RBP12.18□□□□□ -0.46
SSB-202ENST00000409333 BTF3L4Q96K17 158 aa12.18□□□□□ -0.46
SSB-202ENST00000409333 TRAV9-1A0A075B6T8 112 aa12.18□□□□□ -0.46
SSB-202ENST00000409333 COLCA2A8K830 154 aa12.18□□□□□ -0.46
SSB-202ENST00000409333 SNAI2O43623 268 aa12.18□□□□□ -0.46
SSB-202ENST00000409333 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.18□□□□□ -0.46
SSB-202ENST00000409333 OR10AG1Q8NH19 301 aa12.18□□□□□ -0.46
SSB-202ENST00000409333 SSBP4Q9BWG4 385 aaPredicted RBP12.18□□□□□ -0.46
SSB-202ENST00000409333 TRBV24-1A0A075B6N3 115 aa12.17□□□□□ -0.46
SSB-202ENST00000409333 UBE2CO00762 179 aa12.17□□□□□ -0.46
SSB-202ENST00000409333 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
SSB-202ENST00000409333 C11orf72Q8NBR9 251 aa12.17□□□□□ -0.46
SSB-202ENST00000409333 MED14OSP0DP75 135 aa12.16□□□□□ -0.46
SSB-202ENST00000409333 C9orf85Q96MD7 179 aa12.16□□□□□ -0.46
SSB-202ENST00000409333 SCRT2Q9NQ03 307 aa12.16□□□□□ -0.46
SSB-202ENST00000409333 GSN-AS1Q9NRJ2 163 aa12.16□□□□□ -0.46
SSB-202ENST00000409333 A0A1B0GUT8 65 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms