RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 ATP5LO75964 103 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 IGLV2-8P01709 118 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 LEPP41159 167 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 SP5Q6BEB4 398 aaPredicted RBP10.54□□□□□ -0.72
SIRPA-203ENST00000400068 PRR25Q96S07 402 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 ANKRD17O75179 2603 aaKnown RBP10.54□□□□□ -0.72
SIRPA-203ENST00000400068 ZNF502Q8TBZ5 544 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 DSCAML1Q8TD84 2053 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 SEC61GP60059 68 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 PIP4P2Q8N4L2 257 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 GTSF1Q8WW33 167 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 FOXC2Q99958 501 aa10.54□□□□□ -0.72
SIRPA-203ENST00000400068 DOPEY1Q5JWR5 2465 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 TRAV8-6A0A0B4J262 113 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 LTAP01374 205 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 CD7P09564 240 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 TRAV25A0A0B4J276 109 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 Q6AWC8 147 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 FAM231DQ6ZW35 169 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 TTC9CQ8N5M4 171 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 MRPL27Q9P0M9 148 aaKnown RBP10.53□□□□□ -0.72
SIRPA-203ENST00000400068 TRAV9-2A0A087WT02 112 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 PRAC2D3DTV9 90 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 LINC00173Q6ZV60 143 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
SIRPA-203ENST00000400068 G3V4G9 280 aa10.52□□□□□ -0.72
SIRPA-203ENST00000400068 ASIPP42127 132 aa10.52□□□□□ -0.72
SIRPA-203ENST00000400068 LYPD1Q8N2G4 141 aa10.52□□□□□ -0.72
SIRPA-203ENST00000400068 SYT8Q8NBV8 401 aa10.52□□□□□ -0.72
SIRPA-203ENST00000400068 A0A087X0K7 114 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 TRBV7-1A0A0A6YYK4 115 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 RPL13AP40429 203 aaKnown RBP10.52□□□□□ -0.73
SIRPA-203ENST00000400068 ZNF56Q15929 161 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 C8orf86Q6ZUL3 223 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 DTX2Q86UW9 622 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 KALRNO60229 2985 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 SYNJ2BPP57105 145 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 C9orf153Q5TBE3 101 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 MSRB1Q9NZV6 116 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 TMEM14CQ9P0S9 112 aa10.52□□□□□ -0.73
SIRPA-203ENST00000400068 TRAV26-2A0A0B4J265 109 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 IGHV4-59P01825 116 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 DCHS1Q96JQ0 3298 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
SIRPA-203ENST00000400068 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
SIRPA-203ENST00000400068 SCGB1D4Q6XE38 83 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 NPBQ8NG41 125 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 CFHR4Q92496 578 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 TRAV12-3A0A0B4J271 114 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 LMO4P61968 165 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 SRSF9Q13242 221 aaKnown RBP eCLIP10.51□□□□□ -0.73
SIRPA-203ENST00000400068 COA6Q5JTJ3 125 aaKnown RBP10.51□□□□□ -0.73
SIRPA-203ENST00000400068 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 Q71RC1 249 aaPredicted RBP10.51□□□□□ -0.73
SIRPA-203ENST00000400068 PTH2Q96A98 100 aa10.51□□□□□ -0.73
SIRPA-203ENST00000400068 TSPAN13O95857 204 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
SIRPA-203ENST00000400068 TRAV8-2A0A0B4J237 113 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 KIR2DL5BA0A0G2JN68 375 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 KIR2DL5BA0A0G2JPC4 375 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 PDE6HQ13956 83 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 KIR2DL5AQ8N109 375 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 LY6G5BQ8NDX9 201 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 SIRPDQ9H106 197 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 ZNF492Q9P255 531 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 A0A0U1RQV1 116 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 SYS1-DBNDD2H3BUS1 97 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 TRBV12-3P01733 135 aa10.5□□□□□ -0.73
SIRPA-203ENST00000400068 TNFRSF13BO14836 293 aaPredicted RBP10.49□□□□□ -0.73
SIRPA-203ENST00000400068 IGLC2P0DOY2 106 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 IGLC3P0DOY3 106 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 TMEM97Q5BJF2 176 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 GDF5OSQ5U4N7 250 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 DUX3Q96PT4 197 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 ST20Q9HBF5 79 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 LAMA5O15230 3695 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 NDUFA3O95167 84 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 FOXE3Q13461 319 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 RETNQ9HD89 108 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 INS-IGF2F8WCM5 200 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 HBDP02042 147 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 CRYGBP07316 175 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 GATA1P15976 413 aaPredicted RBP10.49□□□□□ -0.73
SIRPA-203ENST00000400068 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
SIRPA-203ENST00000400068 TACC2O95359 2948 aa10.48□□□□□ -0.73
SIRPA-203ENST00000400068 IGHV1-24A0A0C4DH33 117 aa10.48□□□□□ -0.73
SIRPA-203ENST00000400068 IFI27L1Q96BM0 104 aa10.48□□□□□ -0.73
SIRPA-203ENST00000400068 PRSS22Q9GZN4 317 aa10.48□□□□□ -0.73
SIRPA-203ENST00000400068 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
SIRPA-203ENST00000400068 SMIM13P0DJ93 91 aa10.48□□□□□ -0.73
SIRPA-203ENST00000400068 DEFB112Q30KQ8 113 aa10.48□□□□□ -0.73
SIRPA-203ENST00000400068 CHCHD1Q96BP2 118 aaKnown RBP10.48□□□□□ -0.73
SIRPA-203ENST00000400068 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 PSMB11A5LHX3 300 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 LY6LH3BQJ8 138 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 C11orf71Q6IPW1 123 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms