RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 TNRC6BQ9UPQ9 1833 aaKnown RBP8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 OOSP1A8MZH6 123 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 COX6CP09669 75 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 FGF6P10767 208 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 RRN3P1Q2M238 152 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 PIP4P1Q86T03 277 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 FAM110DQ8TAY7 271 aaPredicted RBP8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 MRAP2Q96G30 205 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 OVOL1O14753 267 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 SNCGO76070 127 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 GAS8-AS1O95177 125 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 CRYGBP07316 175 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 ATRXP46100 2492 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 NBEAQ8NFP9 2946 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 LINC00477Q96M19 166 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 HIGD1BQ9P298 99 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 TP53TG1Q9Y2A0 90 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 PTPRQQ9UMZ3 2332 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 BRD3OSQ6XYD6 125 aa8.63□□□□□ -1.03
CSGALNACT1-202ENST00000397998 CEP295Q9C0D2 2601 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 USP34Q70CQ2 3546 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 SORL1Q92673 2214 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 TAL2Q16559 108 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 ANXA2RQ3ZCQ2 193 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 C2CD3Q4AC94 2353 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 TRBV7-1A0A0A6YYK4 115 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 TRAV12-3A0A0B4J271 114 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 PRSS29PA6NIE9 313 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 CLEC2AQ6UVW9 174 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 ANAPC13Q9BS18 74 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 REV3LO60673 3130 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 EYSQ5T1H1 3165 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 IGHV7-81A0A0B4J1V7 117 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 BUB3O43684 328 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 FCN3O75636 299 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 TEX29Q8N6K0 151 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 KLHL30-AS1Q8NEE0 82 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 ATP6V0BQ99437 205 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 VCX2Q9H322 139 aa8.62□□□□□ -1.03
CSGALNACT1-202ENST00000397998 FRYLO94915 3013 aa8.61□□□□□ -1.03
CSGALNACT1-202ENST00000397998 MYO15AQ9UKN7 3530 aa8.61□□□□□ -1.03
CSGALNACT1-202ENST00000397998 F6UB75 175 aa8.61□□□□□ -1.03
CSGALNACT1-202ENST00000397998 IGLC6P0CF74 106 aa8.61□□□□□ -1.03
CSGALNACT1-202ENST00000397998 OR11H6Q8NGC7 330 aa8.61□□□□□ -1.03
CSGALNACT1-202ENST00000397998 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
CSGALNACT1-202ENST00000397998 DEFB1P60022 68 aa8.61□□□□□ -1.03
CSGALNACT1-202ENST00000397998 C9JAW5 83 aa8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 NPBQ8NG41 125 aa8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 A0A096LNJ9 63 aa8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 ZNF688P0C7X2 276 aa8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 GEMIN7Q9H840 131 aaKnown RBP8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 VCYO14598 125 aa8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 GNRH2O43555 120 aa8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 NPC2P61916 151 aa8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 MAPKAPK5-AS1Q8N8E1 139 aa8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 WDFY4Q6ZS81 3184 aa8.6□□□□□ -1.03
CSGALNACT1-202ENST00000397998 IGKV3D-20A0A0C4DH25 116 aa8.59□□□□□ -1.03
CSGALNACT1-202ENST00000397998 SNRPD3P62318 126 aaKnown RBP8.59□□□□□ -1.03
CSGALNACT1-202ENST00000397998 RHPN1-AS1Q9BWJ2 59 aa8.59□□□□□ -1.03
CSGALNACT1-202ENST00000397998 MUC6Q6W4X9 2439 aa8.59□□□□□ -1.03
CSGALNACT1-202ENST00000397998 NPFFO15130 113 aa8.59□□□□□ -1.03
CSGALNACT1-202ENST00000397998 BPESC1Q9GZL8 116 aa8.59□□□□□ -1.03
CSGALNACT1-202ENST00000397998 IGF2RP11717 2491 aa8.59□□□□□ -1.04
CSGALNACT1-202ENST00000397998 FRYQ5TBA9 3013 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 RNF185Q96GF1 192 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 SPAG8Q99932 426 aaPredicted RBP8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 MOB4Q9Y3A3 225 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 U3KQK5 164 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 TMEM262E9PQX1 116 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 OVOL3O00110 214 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 C1orf122Q6ZSJ8 110 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 IGHV3-73A0A0B4J1V6 119 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 ZNF876PQ49A33 203 aa8.58□□□□□ -1.04
CSGALNACT1-202ENST00000397998 PCSK5Q92824 1860 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 SDHAF1A6NFY7 115 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 PMVKQ15126 192 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 DUSP14O95147 198 aaKnown RBP8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 ZFAND6Q6FIF0 208 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 TNFRSF18Q9Y5U5 241 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 GAGE2BQ13066 116 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 GAGE2EQ4V326 116 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 Q8N9W7 124 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 PPDPFLQ8WWR9 84 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 PTH2Q96A98 100 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 GAGE2DQ9UEU5 116 aa8.57□□□□□ -1.04
CSGALNACT1-202ENST00000397998 IGHV3OR16-12A0A075B7B8 117 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 RBAKDNA6NC62 111 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 CD28P10747 220 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 UBE2E1P51965 193 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 C20orf78Q9BR46 151 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 SPXQ9BT56 116 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 NACAE9PAV3 2078 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 KLRB1Q12918 225 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 SMAD5-AS1Q9Y6J3 95 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 E9PLD3 99 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
CSGALNACT1-202ENST00000397998 H3BUX3 64 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms