RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 COL12A1Q99715 3063 aa12.02□□□□□ -0.49
PTBP1-204ENST00000394601 MRPL35Q9NZE8 188 aaKnown RBP12.02□□□□□ -0.49
PTBP1-204ENST00000394601 EFNA4P52798 201 aa12.01□□□□□ -0.49
PTBP1-204ENST00000394601 PDE6HQ13956 83 aa12.01□□□□□ -0.49
PTBP1-204ENST00000394601 Q8N9W7 124 aa12.01□□□□□ -0.49
PTBP1-204ENST00000394601 SCGB1C2P0DMR2 95 aa12.01□□□□□ -0.49
PTBP1-204ENST00000394601 SMIM20Q8N5G0 67 aa12.01□□□□□ -0.49
PTBP1-204ENST00000394601 CHD8Q9HCK8 2581 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 F8W1H4 67 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 HES1Q14469 280 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 MFAP4P55083 255 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 XGP55808 180 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 CSMD2Q7Z408 3487 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 OOSP1A8MZH6 123 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 MINOS1Q5TGZ0 78 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 SHISA2Q6UWI4 295 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 ZFP2Q6ZN57 461 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 MINOS1-NBL1R4GNA1 71 aa12□□□□□ -0.49
PTBP1-204ENST00000394601 C21orf62Q9NYP8 219 aa11.99□□□□□ -0.49
PTBP1-204ENST00000394601 SMPXQ9UHP9 88 aa11.99□□□□□ -0.49
PTBP1-204ENST00000394601 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.99□□□□□ -0.492e-8■■■■□ 21.4
PTBP1-204ENST00000394601 FAM104BQ5XKR9 115 aa11.99□□□□□ -0.49
PTBP1-204ENST00000394601 ZNF502Q8TBZ5 544 aa11.99□□□□□ -0.49
PTBP1-204ENST00000394601 ABCA2Q9BZC7 2435 aa11.98□□□□□ -0.49
PTBP1-204ENST00000394601 LINC01549A6NIU2 74 aa11.98□□□□□ -0.49
PTBP1-204ENST00000394601 HLA-DRB4P13762 266 aa11.98□□□□□ -0.49
PTBP1-204ENST00000394601 HLA-DRB4X5D2U9 266 aa11.98□□□□□ -0.49
PTBP1-204ENST00000394601 NCBP2LA6PVI3 153 aaKnown RBP11.98□□□□□ -0.49
PTBP1-204ENST00000394601 HERV-K104P63124 156 aa11.98□□□□□ -0.49
PTBP1-204ENST00000394601 HLA-DMBP28068 263 aa11.97□□□□□ -0.49
PTBP1-204ENST00000394601 ZNF493Q6ZR52 646 aa11.97□□□□□ -0.49
PTBP1-204ENST00000394601 MAP1LC3AQ9H492 121 aa11.97□□□□□ -0.49
PTBP1-204ENST00000394601 NCOR2Q9Y618 2525 aa11.97□□□□□ -0.49
PTBP1-204ENST00000394601 MAP1AP78559 2803 aaPredicted RBP11.96□□□□□ -0.49
PTBP1-204ENST00000394601 IGHV3-66A0A0C4DH42 116 aa11.96□□□□□ -0.5
PTBP1-204ENST00000394601 LMO4P61968 165 aa11.96□□□□□ -0.5
PTBP1-204ENST00000394601 NFE4Q86UQ8 179 aa11.96□□□□□ -0.5
PTBP1-204ENST00000394601 SH2D1AO60880 128 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 SCGB1A1P11684 91 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 FOXI1Q12951 378 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 ZFAND3Q9H8U3 227 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 BEX4Q9NWD9 120 aaPredicted RBP11.95□□□□□ -0.5
PTBP1-204ENST00000394601 CFAP46Q8IYW2 2715 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 E9PLD3 99 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 DPM2O94777 84 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 ZNF80P51504 273 aaPredicted RBP11.95□□□□□ -0.5
PTBP1-204ENST00000394601 ODF1Q14990 250 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 HIF1ANQ9NWT6 349 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 C2CD3Q4AC94 2353 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 CLPSL1A2RUU4 121 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 SPATA25Q9BR10 227 aa11.95□□□□□ -0.5
PTBP1-204ENST00000394601 UBE2E1P51965 193 aa11.94□□□□□ -0.5
PTBP1-204ENST00000394601 U3KQK5 164 aa11.94□□□□□ -0.5
PTBP1-204ENST00000394601 IGHV3-49A0A0A0MS15 119 aa11.94□□□□□ -0.5
PTBP1-204ENST00000394601 HOXA3O43365 443 aaPredicted RBP11.94□□□□□ -0.5
PTBP1-204ENST00000394601 FHL3Q13643 280 aa11.94□□□□□ -0.5
PTBP1-204ENST00000394601 CRYBG3Q68DQ2 2970 aa11.94□□□□□ -0.5
PTBP1-204ENST00000394601 CUBNO60494 3623 aa11.94□□□□□ -0.5
PTBP1-204ENST00000394601 SORL1Q92673 2214 aa11.94□□□□□ -0.5
PTBP1-204ENST00000394601 MYOZ3Q8TDC0 251 aa11.93□□□□□ -0.5
PTBP1-204ENST00000394601 C19orf84I3L1E1 186 aa11.93□□□□□ -0.5
PTBP1-204ENST00000394601 PAX8Q06710 450 aa11.93□□□□□ -0.5
PTBP1-204ENST00000394601 Q6ZUT4 128 aa11.93□□□□□ -0.5
PTBP1-204ENST00000394601 PRR25Q96S07 402 aa11.93□□□□□ -0.5
PTBP1-204ENST00000394601 AAMDCQ9H7C9 122 aa11.93□□□□□ -0.5
PTBP1-204ENST00000394601 HHLA3Q9XRX5 114 aa11.93□□□□□ -0.5
PTBP1-204ENST00000394601 RRN3P1Q2M238 152 aa11.93□□□□□ -0.5
PTBP1-204ENST00000394601 KLHL30-AS1Q8NEE0 82 aa11.93□□□□□ -0.5
PTBP1-204ENST00000394601 FAM110DQ8TAY7 271 aaPredicted RBP11.93□□□□□ -0.5
PTBP1-204ENST00000394601 SIVA1O15304 175 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 TEX29Q8N6K0 151 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 PHLDA1Q8WV24 401 aaPredicted RBP11.92□□□□□ -0.5
PTBP1-204ENST00000394601 CCDC140Q96MF4 163 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 TRAV8-2A0A0B4J237 113 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 OR11H12B2RN74 326 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 TNFRSF6BO95407 300 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 RPL7P18124 248 aaKnown RBP11.92□□□□□ -0.5
PTBP1-204ENST00000394601 LY6DQ14210 128 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 OR11H1Q8NG94 326 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 OR11H2Q8NH07 326 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 RAX2Q96IS3 184 aa11.92□□□□□ -0.5
PTBP1-204ENST00000394601 ATP6V0E1O15342 81 aa11.91□□□□□ -0.5
PTBP1-204ENST00000394601 SAA4P35542 130 aa11.91□□□□□ -0.5
PTBP1-204ENST00000394601 A0A1B0GW15 77 aa11.91□□□□□ -0.5
PTBP1-204ENST00000394601 ITLN2Q8WWU7 325 aaPredicted RBP11.91□□□□□ -0.5
PTBP1-204ENST00000394601 C1QTNF4Q9BXJ3 329 aa11.91□□□□□ -0.5
PTBP1-204ENST00000394601 ERCC8Q13216 396 aa11.91□□□□□ -0.5
PTBP1-204ENST00000394601 C15orf32Q32M92 178 aa11.91□□□□□ -0.5
PTBP1-204ENST00000394601 Q6AWC8 147 aa11.91□□□□□ -0.5
PTBP1-204ENST00000394601 CDIP1Q9H305 208 aa11.91□□□□□ -0.5
PTBP1-204ENST00000394601 BUB3O43684 328 aa11.9□□□□□ -0.5
PTBP1-204ENST00000394601 C19orf54Q5BKX5 351 aa11.9□□□□□ -0.5
PTBP1-204ENST00000394601 BPESC1Q9GZL8 116 aa11.9□□□□□ -0.5
PTBP1-204ENST00000394601 IGLC6P0CF74 106 aa11.9□□□□□ -0.5
PTBP1-204ENST00000394601 PRAC2D3DTV9 90 aa11.89□□□□□ -0.51
PTBP1-204ENST00000394601 TCTEX1D4Q5JR98 221 aa11.89□□□□□ -0.51
PTBP1-204ENST00000394601 CENPVL3A0A0U1RRI6 287 aa11.89□□□□□ -0.51
PTBP1-204ENST00000394601 G3V318 75 aa11.89□□□□□ -0.51
PTBP1-204ENST00000394601 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
PTBP1-204ENST00000394601 PRORYQ9H606 182 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms