RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 GAGE12HA6NDE8 117 aa12.44□□□□□ -0.42
PDZD4-202ENST00000393758 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
PDZD4-202ENST00000393758 RNF185Q96GF1 192 aa12.44□□□□□ -0.42
PDZD4-202ENST00000393758 SMAD5-AS1Q9Y6J3 95 aa12.44□□□□□ -0.42
PDZD4-202ENST00000393758 IGHV7-81A0A0B4J1V7 117 aa12.44□□□□□ -0.42
PDZD4-202ENST00000393758 LINC01549A6NIU2 74 aa12.44□□□□□ -0.42
PDZD4-202ENST00000393758 F6UB75 175 aa12.44□□□□□ -0.42
PDZD4-202ENST00000393758 SLC25A16P16260 332 aa12.44□□□□□ -0.42
PDZD4-202ENST00000393758 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
PDZD4-202ENST00000393758 IGKV3D-20A0A0C4DH25 116 aa12.44□□□□□ -0.42
PDZD4-202ENST00000393758 LAMA5O15230 3695 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 IGLC6P0CF74 106 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 PLNP26678 52 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 SAA4P35542 130 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 UFSP1Q6NVU6 142 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 C2orf66Q6UXQ4 117 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 BRD3OSQ6XYD6 125 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 CACNA1AO00555 2505 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 FAM208BQ5VWN6 2430 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 A0A1B0GV72 72 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 HLA-DRB4P13762 266 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 PAX8Q06710 450 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 KLHL30-AS1Q8NEE0 82 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 HLA-DRB4X5D2U9 266 aa12.43□□□□□ -0.42
PDZD4-202ENST00000393758 A0A087WWL8 130 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 TNFRSF13BO14836 293 aaPredicted RBP12.42□□□□□ -0.42
PDZD4-202ENST00000393758 ORMDL2Q53FV1 153 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 LINC01548A6NM66 108 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 BUB3O43684 328 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 PRSS2P07478 247 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 SUMO2P61956 95 aaKnown RBP12.42□□□□□ -0.42
PDZD4-202ENST00000393758 PSMG4Q5JS54 123 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 A0A087WX48 190 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 NDUFS8O00217 210 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 MRPS12O15235 138 aaKnown RBP12.42□□□□□ -0.42
PDZD4-202ENST00000393758 IGF1P05019 195 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 SMIM2Q9BVW6 85 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 U3KQK5 164 aa12.42□□□□□ -0.42
PDZD4-202ENST00000393758 HOXB4P17483 251 aaPredicted RBP12.41□□□□□ -0.42
PDZD4-202ENST00000393758 F8VRH5 84 aa12.41□□□□□ -0.42
PDZD4-202ENST00000393758 Q8NA96 180 aa12.41□□□□□ -0.42
PDZD4-202ENST00000393758 ACACBO00763 2458 aa12.41□□□□□ -0.42
PDZD4-202ENST00000393758 PTPN13Q12923 2485 aa12.41□□□□□ -0.42
PDZD4-202ENST00000393758 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
PDZD4-202ENST00000393758 C11orf21Q9P2W6 132 aa12.41□□□□□ -0.42
PDZD4-202ENST00000393758 M0R1W7 72 aa12.4□□□□□ -0.42
PDZD4-202ENST00000393758 ZNF56Q15929 161 aa12.4□□□□□ -0.42
PDZD4-202ENST00000393758 OR11H6Q8NGC7 330 aa12.4□□□□□ -0.42
PDZD4-202ENST00000393758 TRAV21A0A0B4J279 112 aa12.4□□□□□ -0.42
PDZD4-202ENST00000393758 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
PDZD4-202ENST00000393758 FOXI2Q6ZQN5 318 aa12.4□□□□□ -0.42
PDZD4-202ENST00000393758 NPBQ8NG41 125 aa12.4□□□□□ -0.42
PDZD4-202ENST00000393758 KIR2DL4Q99706 377 aa12.4□□□□□ -0.42
PDZD4-202ENST00000393758 AKAP13Q12802 2813 aa12.4□□□□□ -0.42
PDZD4-202ENST00000393758 GNRH2O43555 120 aa12.4□□□□□ -0.43
PDZD4-202ENST00000393758 C16orf54Q6UWD8 224 aa12.4□□□□□ -0.43
PDZD4-202ENST00000393758 MYO9AB2RTY4 2548 aa12.39□□□□□ -0.43
PDZD4-202ENST00000393758 CD7P09564 240 aa12.39□□□□□ -0.43
PDZD4-202ENST00000393758 DMXL1Q9Y485 3027 aa12.39□□□□□ -0.43
PDZD4-202ENST00000393758 ANXA2RQ3ZCQ2 193 aa12.39□□□□□ -0.43
PDZD4-202ENST00000393758 SPTBN4Q9H254 2564 aa12.39□□□□□ -0.43
PDZD4-202ENST00000393758 LGALS3P17931 250 aaKnown RBP12.39□□□□□ -0.43
PDZD4-202ENST00000393758 CLEC2AQ6UVW9 174 aa12.39□□□□□ -0.43
PDZD4-202ENST00000393758 HHLA3Q9XRX5 114 aa12.39□□□□□ -0.43
PDZD4-202ENST00000393758 USP9YO00507 2555 aaPredicted RBP12.38□□□□□ -0.43
PDZD4-202ENST00000393758 F8W1H4 67 aa12.38□□□□□ -0.43
PDZD4-202ENST00000393758 LY6LH3BQJ8 138 aa12.38□□□□□ -0.43
PDZD4-202ENST00000393758 LINC01559Q495D7 138 aa12.38□□□□□ -0.43
PDZD4-202ENST00000393758 RAX2Q96IS3 184 aa12.38□□□□□ -0.43
PDZD4-202ENST00000393758 DPH3P1Q9H4G8 78 aa12.38□□□□□ -0.43
PDZD4-202ENST00000393758 PRSS29PA6NIE9 313 aa12.38□□□□□ -0.43
PDZD4-202ENST00000393758 CKS1BP61024 79 aa12.38□□□□□ -0.43
PDZD4-202ENST00000393758 LYRM7Q5U5X0 104 aa12.38□□□□□ -0.43
PDZD4-202ENST00000393758 SYT8Q8NBV8 401 aa12.38□□□□□ -0.43
PDZD4-202ENST00000393758 FAM110DQ8TAY7 271 aaPredicted RBP12.38□□□□□ -0.43
PDZD4-202ENST00000393758 SMG1Q96Q15 3661 aaKnown RBP12.37□□□□□ -0.43
PDZD4-202ENST00000393758 ZFP36P26651 326 aaKnown RBP12.37□□□□□ -0.43
PDZD4-202ENST00000393758 RRN3P1Q2M238 152 aa12.37□□□□□ -0.43
PDZD4-202ENST00000393758 Q8N9W7 124 aa12.37□□□□□ -0.43
PDZD4-202ENST00000393758 WNK1Q9H4A3 2382 aa12.37□□□□□ -0.43
PDZD4-202ENST00000393758 SETD2Q9BYW2 2564 aaPredicted RBP12.37□□□□□ -0.43
PDZD4-202ENST00000393758 TRAV41A0A0B4J266 112 aa12.37□□□□□ -0.43
PDZD4-202ENST00000393758 PTH2Q96A98 100 aa12.37□□□□□ -0.43
PDZD4-202ENST00000393758 SPOCK3Q9BQ16 436 aa12.37□□□□□ -0.43
PDZD4-202ENST00000393758 LRBAP50851 2863 aa12.36□□□□□ -0.43
PDZD4-202ENST00000393758 DLX4Q92988 240 aaPredicted RBP12.36□□□□□ -0.43
PDZD4-202ENST00000393758 HIGD1BQ9P298 99 aa12.36□□□□□ -0.43
PDZD4-202ENST00000393758 TP53TG1Q9Y2A0 90 aa12.36□□□□□ -0.43
PDZD4-202ENST00000393758 TRAV2A0A0B4J234 112 aa12.36□□□□□ -0.43
PDZD4-202ENST00000393758 F8W735 103 aaPredicted RBP12.36□□□□□ -0.43
PDZD4-202ENST00000393758 INSL3P51460 131 aa12.36□□□□□ -0.43
PDZD4-202ENST00000393758 SPAG8Q99932 426 aaPredicted RBP12.36□□□□□ -0.43
PDZD4-202ENST00000393758 BPESC1Q9GZL8 116 aa12.36□□□□□ -0.43
PDZD4-202ENST00000393758 TRAV12-3A0A0B4J271 114 aa12.35□□□□□ -0.43
PDZD4-202ENST00000393758 HIVEP3Q5T1R4 2406 aa12.35□□□□□ -0.43
PDZD4-202ENST00000393758 MINOS1Q5TGZ0 78 aa12.35□□□□□ -0.43
PDZD4-202ENST00000393758 TMEM190Q8WZ59 177 aa12.35□□□□□ -0.43
PDZD4-202ENST00000393758 MINOS1-NBL1R4GNA1 71 aa12.35□□□□□ -0.43
PDZD4-202ENST00000393758 DUSP14O95147 198 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms