RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 TMEM70Q9BUB7 260 aa4.92□□□□□ -1.62
CHD6-202ENST00000373222 LAMTOR2Q9Y2Q5 125 aa4.92□□□□□ -1.62
CHD6-202ENST00000373222 CHD6Q8TD26 2715 aa4.92□□□□□ -1.62
CHD6-202ENST00000373222 A0A096LNJ9 63 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.91□□□□□ -1.62
CHD6-202ENST00000373222 D6R8Y8 96 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 SYS1-DBNDD2H3BUS1 97 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 M0R1W7 72 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 LEPROTL1O95214 131 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 IFI27P40305 119 aaPredicted RBP4.91□□□□□ -1.62
CHD6-202ENST00000373222 ANXA2RQ3ZCQ2 193 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 BRD3OSQ6XYD6 125 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 TTC9CQ8N5M4 171 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 SMIM12Q96EX1 92 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 RNF5Q99942 180 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 UQCR10Q9UDW1 63 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 TRAV9-2A0A087WT02 112 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 M0QXV9 152 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 ZNF415Q09FC8 603 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 CLEC19AQ6UXS0 136 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 MAP1LC3CQ9BXW4 147 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 GFRA4Q9GZZ7 299 aa4.91□□□□□ -1.62
CHD6-202ENST00000373222 DLEU1O43261 78 aa4.9□□□□□ -1.62
CHD6-202ENST00000373222 UCNP55089 124 aa4.9□□□□□ -1.62
CHD6-202ENST00000373222 RHOGP84095 191 aa4.9□□□□□ -1.62
CHD6-202ENST00000373222 CFHR3Q02985 330 aa4.9□□□□□ -1.62
CHD6-202ENST00000373222 LCNL1Q6ZST4 164 aa4.9□□□□□ -1.62
CHD6-202ENST00000373222 AAMDCQ9H7C9 122 aa4.9□□□□□ -1.62
CHD6-202ENST00000373222 CLPSL1A2RUU4 121 aa4.9□□□□□ -1.63
CHD6-202ENST00000373222 GATA1P15976 413 aaPredicted RBP4.9□□□□□ -1.63
CHD6-202ENST00000373222 LMO4P61968 165 aa4.9□□□□□ -1.63
CHD6-202ENST00000373222 NDFIP1Q9BT67 221 aa4.9□□□□□ -1.63
CHD6-202ENST00000373222 ZFP30Q9Y2G7 519 aa4.9□□□□□ -1.63
CHD6-202ENST00000373222 NOTCH3Q9UM47 2321 aa4.9□□□□□ -1.63
CHD6-202ENST00000373222 TMEM189A5PLL7 270 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 TRBV12-3P01733 135 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 IGF1P05019 195 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 GNLYP22749 145 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 MPV17L2Q567V2 206 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 C19orf73Q9NVV2 129 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 SIGLEC8Q9NYZ4 499 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 C11orf21Q9P2W6 132 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 CCDC168Q8NDH2 2452 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 WNK1Q9H4A3 2382 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 IGHV2-70DA0A0C4DH43 119 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 NPYP01303 97 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 CT45A10P0DMU9 189 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 EBI3Q14213 229 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 MRPL51Q4U2R6 128 aaKnown RBP4.89□□□□□ -1.63
CHD6-202ENST00000373222 OR8A1Q8NGG7 326 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 ZNF502Q8TBZ5 544 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 RABAC1Q9UI14 185 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 GOLT1BQ9Y3E0 138 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 NAV2Q8IVL1 2488 aa4.89□□□□□ -1.63
CHD6-202ENST00000373222 CENPVL3A0A0U1RRI6 287 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 FAM231BA6NCW3 169 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 M0QZK8 103 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 CRXO43186 299 aaPredicted RBP4.88□□□□□ -1.63
CHD6-202ENST00000373222 ORM1P02763 201 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 EVI2AP22794 236 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 TWIST1Q15672 202 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 COL5A1-AS1Q5SY13 56 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 FAM162BQ5T6X4 162 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 PRSS3P2Q8NHM4 247 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 ITLN2Q8WWU7 325 aaPredicted RBP4.88□□□□□ -1.63
CHD6-202ENST00000373222 CHCHD1Q96BP2 118 aaKnown RBP4.88□□□□□ -1.63
CHD6-202ENST00000373222 APCP25054 2843 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 MUC4Q99102 2169 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 TRAV30A0A087WSZ9 112 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 TCF21O43680 179 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 BUB3O43684 328 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 IGHV4-39P01824 125 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 RPL7P18124 248 aaKnown RBP4.88□□□□□ -1.63
CHD6-202ENST00000373222 CSN1S1P47710 185 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 RIGQ13278 110 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 LY6EQ16553 131 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 LYPD1Q8N2G4 141 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 ZNF747Q9BV97 191 aa4.88□□□□□ -1.63
CHD6-202ENST00000373222 IGKV3-7A0A075B6H7 116 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 TRAV8-2A0A0B4J237 113 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 TRAV40A0A0B4J280 105 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 TRBV6-1A0A0K0K1D8 114 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 CCL25O15444 150 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 TRGV3P03979 118 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 IGHV4-38-2P0DP08 117 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 UBE2E1P51965 193 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 PDE6HQ13956 83 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 FAM104BQ5XKR9 115 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 UNQ9165/PRO28630Q6UXU0 137 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 KLHDC1Q8N7A1 406 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 PRELID3AQ96N28 172 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 C18orf15Q96N68 181 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 JMJD1CQ15652 2540 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 TRAV26-2A0A0B4J265 109 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 IGKV3D-20A0A0C4DH25 116 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 IGHV4-61A0A0C4DH41 118 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 NUDT3O95989 172 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 IGHV3-11P01762 117 aa4.87□□□□□ -1.63
CHD6-202ENST00000373222 OR5AL1P0C617 328 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms