RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TRAV4A0A0B4J268 109 aa14.27□□□□□ -0.12
SNX27-202ENST00000368841 CEP250Q9BV73 2442 aa14.27□□□□□ -0.12
SNX27-202ENST00000368841 TRAV13-2A0A0B4J235 113 aa14.27□□□□□ -0.12
SNX27-202ENST00000368841 PROP1O75360 226 aa14.27□□□□□ -0.12
SNX27-202ENST00000368841 IGHV2-5P01817 119 aa14.27□□□□□ -0.12
SNX27-202ENST00000368841 IFITM1P13164 125 aa14.27□□□□□ -0.12
SNX27-202ENST00000368841 BVES-AS1Q5T3Y7 98 aa14.27□□□□□ -0.12
SNX27-202ENST00000368841 PRSS33Q8NF86 280 aa14.27□□□□□ -0.12
SNX27-202ENST00000368841 PRO1854Q9UHT4 67 aa14.27□□□□□ -0.12
SNX27-202ENST00000368841 MRPL52Q86TS9 123 aaKnown RBP14.27□□□□□ -0.12
SNX27-202ENST00000368841 CTSZQ9UBR2 303 aa14.27□□□□□ -0.13
SNX27-202ENST00000368841 VPREB3Q9UKI3 123 aa14.27□□□□□ -0.13
SNX27-202ENST00000368841 A8MWP6 167 aa14.27□□□□□ -0.13
SNX27-202ENST00000368841 LMO1P25800 156 aa14.26□□□□□ -0.13
SNX27-202ENST00000368841 J3QLI3 93 aa14.26□□□□□ -0.13
SNX27-202ENST00000368841 RHOHQ15669 191 aa14.26□□□□□ -0.13
SNX27-202ENST00000368841 IGLC1P0CG04 106 aa14.26□□□□□ -0.13
SNX27-202ENST00000368841 GP9P14770 177 aa14.26□□□□□ -0.13
SNX27-202ENST00000368841 DEFB1P60022 68 aa14.25□□□□□ -0.13
SNX27-202ENST00000368841 ZNF503Q96F45 646 aa14.25□□□□□ -0.13
SNX27-202ENST00000368841 IGHV4-61A0A0C4DH41 118 aa14.25□□□□□ -0.13
SNX27-202ENST00000368841 BLCAPP62952 87 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 FOXI2Q6ZQN5 318 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 COX8AP10176 69 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 WT1P19544 449 aaPredicted RBP14.24□□□□□ -0.13
SNX27-202ENST00000368841 C1orf43Q9BWL3 253 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 OR11H6Q8NGC7 330 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 COX7B2Q8TF08 81 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 A0A1W2PPM0 123 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 CAMK2N2Q96S95 79 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 DOCK10Q96BY6 2186 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 RLFQ13129 1914 aa14.24□□□□□ -0.13
SNX27-202ENST00000368841 FAM186AA6NE01 2351 aa14.23□□□□□ -0.13
SNX27-202ENST00000368841 CACNA1EQ15878 2313 aa14.23□□□□□ -0.13
SNX27-202ENST00000368841 ETDCA0A1B0GVM5 59 aa14.23□□□□□ -0.13
SNX27-202ENST00000368841 ZNF491Q8N8L2 437 aa14.23□□□□□ -0.13
SNX27-202ENST00000368841 CHKB-CPT1BH3BT56 60 aa14.23□□□□□ -0.13
SNX27-202ENST00000368841 BAALC-AS2P0C853 105 aa14.23□□□□□ -0.13
SNX27-202ENST00000368841 DEFB113Q30KQ7 82 aa14.23□□□□□ -0.13
SNX27-202ENST00000368841 PPDPFLQ8WWR9 84 aa14.23□□□□□ -0.13
SNX27-202ENST00000368841 TMEM14CQ9P0S9 112 aa14.23□□□□□ -0.13
SNX27-202ENST00000368841 NCKAP5O14513 1909 aa14.22□□□□□ -0.13
SNX27-202ENST00000368841 SPATA25Q9BR10 227 aa14.22□□□□□ -0.13
SNX27-202ENST00000368841 K7EP34 96 aa14.22□□□□□ -0.13
SNX27-202ENST00000368841 PCP2Q8IVA1 136 aa14.22□□□□□ -0.13
SNX27-202ENST00000368841 HEATR5AQ86XA9 2040 aa14.22□□□□□ -0.13
SNX27-202ENST00000368841 NTN5Q8WTR8 489 aaPredicted RBP14.22□□□□□ -0.13
SNX27-202ENST00000368841 LTAP01374 205 aa14.21□□□□□ -0.13
SNX27-202ENST00000368841 PLXNA4Q9HCM2 1894 aa14.21□□□□□ -0.13
SNX27-202ENST00000368841 F8VRH5 84 aa14.21□□□□□ -0.13
SNX27-202ENST00000368841 HIST2H2BDQ6DRA6 164 aa14.21□□□□□ -0.13
SNX27-202ENST00000368841 TRBV20-1A0A075B6N2 111 aa14.21□□□□□ -0.13
SNX27-202ENST00000368841 IGHV4OR15-8A0A075B7B6 117 aa14.21□□□□□ -0.13
SNX27-202ENST00000368841 A0A087WW49 117 aa14.21□□□□□ -0.13
SNX27-202ENST00000368841 RBM3P98179 157 aaKnown RBP14.21□□□□□ -0.13
SNX27-202ENST00000368841 ANKRD29Q8N6D5 301 aa14.21□□□□□ -0.13
SNX27-202ENST00000368841 K7EQD1 137 aa14.21□□□□□ -0.14
SNX27-202ENST00000368841 AGPAT4-IT1Q9H0P7 198 aa14.21□□□□□ -0.14
SNX27-202ENST00000368841 DIDO1Q9BTC0 2240 aaKnown RBP14.21□□□□□ -0.14
SNX27-202ENST00000368841 LGALS9BQ3B8N2 356 aa14.2□□□□□ -0.14
SNX27-202ENST00000368841 LGALS9CQ6DKI2 356 aa14.2□□□□□ -0.14
SNX27-202ENST00000368841 TMEM190Q8WZ59 177 aa14.2□□□□□ -0.14
SNX27-202ENST00000368841 C12orf74Q32Q52 190 aa14.2□□□□□ -0.14
SNX27-202ENST00000368841 UTF1Q5T230 341 aa14.2□□□□□ -0.14
SNX27-202ENST00000368841 ORMDL1Q9P0S3 153 aa14.2□□□□□ -0.14
SNX27-202ENST00000368841 C9orf66Q5T8R8 295 aa14.2□□□□□ -0.14
SNX27-202ENST00000368841 IGLV1-44P01699 117 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 SLC25A29Q8N8R3 303 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 IGKV3D-7A0A0C4DH55 119 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 IGHV2-70P01814 119 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 RSPO1Q2MKA7 263 aaPredicted RBP14.19□□□□□ -0.14
SNX27-202ENST00000368841 IGFL3Q6UXB1 125 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 AJUBAQ96IF1 538 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 K7EP13 123 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 CT83Q5H943 113 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 SEM1Q6ZVN7 128 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 ICOSQ9Y6W8 199 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 ELANEP08246 267 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 COL6A6A6NMZ7 2263 aa14.19□□□□□ -0.14
SNX27-202ENST00000368841 TEX48A0A1B0GUV7 120 aa14.18□□□□□ -0.14
SNX27-202ENST00000368841 CDPF1Q6NVV7 123 aa14.18□□□□□ -0.14
SNX27-202ENST00000368841 TNRC6BQ9UPQ9 1833 aaKnown RBP14.18□□□□□ -0.14
SNX27-202ENST00000368841 DYSFO75923 2080 aa14.18□□□□□ -0.14
SNX27-202ENST00000368841 C9orf47Q6ZRZ4 202 aa14.18□□□□□ -0.14
SNX27-202ENST00000368841 CCL25O15444 150 aa14.18□□□□□ -0.14
SNX27-202ENST00000368841 UBE2AP49459 152 aa14.18□□□□□ -0.14
SNX27-202ENST00000368841 DEFB135Q30KP9 77 aa14.18□□□□□ -0.14
SNX27-202ENST00000368841 F8W1H4 67 aa14.17□□□□□ -0.14
SNX27-202ENST00000368841 WFDC9Q8NEX5 89 aa14.17□□□□□ -0.14
SNX27-202ENST00000368841 HIST2H2BCQ6DN03 193 aa14.17□□□□□ -0.14
SNX27-202ENST00000368841 BAALCQ8WXS3 180 aa14.17□□□□□ -0.14
SNX27-202ENST00000368841 CENPVL3A0A0U1RRI6 287 aa14.17□□□□□ -0.14
SNX27-202ENST00000368841 C1orf147Q96MC9 270 aaPredicted RBP14.17□□□□□ -0.14
SNX27-202ENST00000368841 MSRB1Q9NZV6 116 aa14.16□□□□□ -0.14
SNX27-202ENST00000368841 CADP27708 2225 aa14.16□□□□□ -0.14
SNX27-202ENST00000368841 IGLC7A0M8Q6 106 aa14.16□□□□□ -0.14
SNX27-202ENST00000368841 IGHG2P01859 326 aa14.16□□□□□ -0.14
SNX27-202ENST00000368841 PLA2G2CQ5R387 149 aa14.16□□□□□ -0.14
SNX27-202ENST00000368841 LINC00311Q8N616 119 aa14.16□□□□□ -0.14
SNX27-202ENST00000368841 RBAKDNA6NC62 111 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms