RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 CFAP126Q5VTH2 177 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 COPS6Q7L5N1 327 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 TMCO2Q7Z6W1 182 aaPredicted RBP-1.28□□□□□ -2.61
MIR539-201ENST00000365690 TRAPPC5Q8IUR0 188 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 CD302Q8IX05 232 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 TEX29Q8N6K0 151 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 CT55Q8WUE5 264 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 PPP1R2P1Q96PQ5 205 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 SMIM7Q9BQ49 75 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 VPS25Q9BRG1 176 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 MRM2Q9UI43 246 aaKnown RBP-1.28□□□□□ -2.61
MIR539-201ENST00000365690 LRP6O75581 1613 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 ZMYM4Q5VZL5 1548 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 NEO1Q92859 1461 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 CEP164Q9UPV0 1460 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 COL12A1Q99715 3063 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 FAM92AA1XBS5 289 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 TMEM210A6NLX4 147 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 GOLGA8KD6RF30 607 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 K7ERJ3 54 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 PFDN6O15212 129 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 SSNA1O43805 119 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 EDF1O60869 148 aaKnown RBP-1.29□□□□□ -2.62
MIR539-201ENST00000365690 BRI3O95415 125 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 IFNA21P01568 189 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 MT-ND6P03923 174 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 RD3LP0DJH9 198 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 MYL12AP19105 171 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 RPL12P30050 165 aaKnown RBP-1.29□□□□□ -2.62
MIR539-201ENST00000365690 GTF2A1P52655 376 aaPredicted RBP-1.29□□□□□ -2.62
MIR539-201ENST00000365690 ARPP19P56211 112 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 UBE2G2P60604 165 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 NAA20P61599 178 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 TNNC1P63316 161 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 MRPS36P82909 103 aaKnown RBP-1.29□□□□□ -2.62
MIR539-201ENST00000365690 SLAMF1Q13291 335 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 KRTAP20-1Q3LI63 56 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 Q5VV11 94 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 FAM151BQ6UXP7 276 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 C20orf197Q8N268 126 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 DEFB123Q8N688 67 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 OR8J2Q8NGG1 315 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 BRK1Q8WUW1 75 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 TAF9BQ9HBM6 251 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 C1orf109Q9NX04 203 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 PKIGQ9Y2B9 76 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 DOCK1Q14185 1865 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 NUP98P52948 1817 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 PKD1L2Q7Z442 2459 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 CCDC168Q8NDH2 2452 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 COL4A6Q14031 1691 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 HECW1Q76N89 1606 aa-1.29□□□□□ -2.62
MIR539-201ENST00000365690 AKAP11Q9UKA4 1901 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 KIAA1549LQ6ZVL6 1849 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 ANK3Q12955 4377 aaKnown RBP-1.3□□□□□ -2.62
MIR539-201ENST00000365690 A0A1B0GW64 132 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 H0YJX3 145 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 HPGDSO60760 199 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 HIST1H2BKO60814 126 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 PTMAP06454 111 aaKnown RBP-1.3□□□□□ -2.62
MIR539-201ENST00000365690 CRHP06850 196 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 HIST1H2BJP06899 126 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 C8GP07360 202 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 CXCL1P09341 107 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 OCMP0CE72 109 aaPredicted RBP-1.3□□□□□ -2.62
MIR539-201ENST00000365690 STAG3L3P0CL85 134 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 PET100P0DJ07 73 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 GALP22466 123 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 KDELR2P33947 212 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 MYL6P60660 151 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 ARF6P62330 175 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 OR8B8Q15620 311 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 ALKAL1Q6UXT8 129 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 BAGE3Q86Y29 109 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 OR6V1Q8N148 313 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 LRRC20Q8TCA0 184 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 CCDC124Q96CT7 223 aaKnown RBP-1.3□□□□□ -2.62
MIR539-201ENST00000365690 SMIM19Q96E16 107 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 SIGMAR1Q99720 223 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 WFDC6Q9BQY6 131 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 LSM5Q9Y4Y9 91 aaKnown RBP-1.3□□□□□ -2.62
MIR539-201ENST00000365690 MPC1Q9Y5U8 109 aa-1.3□□□□□ -2.62
MIR539-201ENST00000365690 BZW2Q9Y6E2 419 aaKnown RBP-1.3□□□□□ -2.62
MIR539-201ENST00000365690 GAPVD1Q14C86 1478 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 AKAP9Q99996 3911 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 GOLGA4Q13439 2230 aaKnown RBP-1.31□□□□□ -2.62
MIR539-201ENST00000365690 KDM3BQ7LBC6 1761 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 VPS13BQ7Z7G8 4022 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 hADV38S2A0JD32 116 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 CNIH1O95406 144 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 IFNA6P05013 189 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 SAA1P0DJI8 122 aaPredicted RBP-1.31□□□□□ -2.62
MIR539-201ENST00000365690 NFYBP25208 207 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 EDDM3BP56851 147 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 UBE2D3P61077 147 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 UBE2D2P62837 147 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 CDC37Q16543 378 aaPredicted RBP-1.31□□□□□ -2.62
MIR539-201ENST00000365690 DEFB110Q30KQ9 67 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 SDHAF4Q5VUM1 108 aa-1.31□□□□□ -2.62
MIR539-201ENST00000365690 OR2T2Q6IF00 324 aa-1.31□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms