RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 SYT8Q8NBV8 401 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 RNF183Q96D59 192 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 RNF125Q96EQ8 232 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 CDIP1Q9H305 208 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 SS18L2Q9UHA2 77 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 ZANQ9Y493 2812 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 K7EIM0 57 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 IGFL4Q6B9Z1 124 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 LYPD1Q8N2G4 141 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 SIRPDQ9H106 197 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 TMEM160Q9NX00 188 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 ERG28Q9UKR5 140 aa11.82□□□□□ -0.52
LRRTM1-201ENST00000295057 ABCA12Q86UK0 2595 aa11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 SRSF1Q07955 248 aaKnown RBP eCLIP11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 TRAV40A0A0B4J280 105 aa11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 MT-ATP8P03928 68 aa11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 FCER1GP30273 86 aa11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 KLF17Q5JT82 389 aaPredicted RBP11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 TMEM158Q8WZ71 300 aa11.81□□□□□ -0.52
LRRTM1-201ENST00000295057 USP9YO00507 2555 aaPredicted RBP11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 IGHV4-61A0A0C4DH41 118 aa11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 CNIH1O95406 144 aa11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 FOXI1Q12951 378 aa11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 C12orf74Q32Q52 190 aa11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 LCNL1Q6ZST4 164 aa11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 AAMDCQ9H7C9 122 aa11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 TNFRSF6BO95407 300 aa11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 PPIFP30405 207 aaKnown RBP11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 PRR25Q96S07 402 aa11.8□□□□□ -0.52
LRRTM1-201ENST00000295057 IGLC6P0CF74 106 aa11.79□□□□□ -0.52
LRRTM1-201ENST00000295057 C1QTNF4Q9BXJ3 329 aa11.79□□□□□ -0.52
LRRTM1-201ENST00000295057 NCBP2LA6PVI3 153 aaKnown RBP11.79□□□□□ -0.52
LRRTM1-201ENST00000295057 DPM2O94777 84 aa11.79□□□□□ -0.52
LRRTM1-201ENST00000295057 TMEM95Q3KNT9 176 aa11.79□□□□□ -0.52
LRRTM1-201ENST00000295057 MRPL35Q9NZE8 188 aaKnown RBP11.79□□□□□ -0.52
LRRTM1-201ENST00000295057 PTPN13Q12923 2485 aa11.79□□□□□ -0.52
LRRTM1-201ENST00000295057 NBR2O15453 112 aa11.78□□□□□ -0.52
LRRTM1-201ENST00000295057 HLA-DMBP28068 263 aa11.78□□□□□ -0.52
LRRTM1-201ENST00000295057 RRN3P1Q2M238 152 aa11.78□□□□□ -0.52
LRRTM1-201ENST00000295057 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
LRRTM1-201ENST00000295057 ATP5J2P56134 94 aa11.78□□□□□ -0.52
LRRTM1-201ENST00000295057 C1orf122Q6ZSJ8 110 aa11.78□□□□□ -0.52
LRRTM1-201ENST00000295057 Q6ZUT4 128 aa11.78□□□□□ -0.52
LRRTM1-201ENST00000295057 IGHV4-30-2A0A087WSY4 118 aa11.77□□□□□ -0.52
LRRTM1-201ENST00000295057 ORM1P02763 201 aa11.77□□□□□ -0.52
LRRTM1-201ENST00000295057 XGP55808 180 aa11.77□□□□□ -0.53
LRRTM1-201ENST00000295057 ATP6V0E2Q8NHE4 81 aa11.77□□□□□ -0.53
LRRTM1-201ENST00000295057 TENM4Q6N022 2769 aa11.77□□□□□ -0.53
LRRTM1-201ENST00000295057 LINC01546A6NGU7 62 aa11.76□□□□□ -0.53
LRRTM1-201ENST00000295057 SAA4P35542 130 aa11.76□□□□□ -0.53
LRRTM1-201ENST00000295057 NDPQ00604 133 aa11.76□□□□□ -0.53
LRRTM1-201ENST00000295057 TAL2Q16559 108 aa11.76□□□□□ -0.53
LRRTM1-201ENST00000295057 HIST1H4GQ99525 98 aa11.76□□□□□ -0.53
LRRTM1-201ENST00000295057 ANAPC13Q9BS18 74 aa11.76□□□□□ -0.53
LRRTM1-201ENST00000295057 GAGE5Q13069 117 aa11.75□□□□□ -0.53
LRRTM1-201ENST00000295057 GAGE6Q13070 117 aa11.75□□□□□ -0.53
LRRTM1-201ENST00000295057 FHL3Q13643 280 aa11.75□□□□□ -0.53
LRRTM1-201ENST00000295057 PSMG3-AS1Q96PY0 264 aa11.75□□□□□ -0.53
LRRTM1-201ENST00000295057 NXT2Q9NPJ8 142 aaKnown RBP11.75□□□□□ -0.53
LRRTM1-201ENST00000295057 RNF5Q99942 180 aa11.75□□□□□ -0.53
LRRTM1-201ENST00000295057 ANKRD17O75179 2603 aaKnown RBP11.75□□□□□ -0.53
LRRTM1-201ENST00000295057 NDUFA3O95167 84 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 PDE6HQ13956 83 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 NPBQ8NG41 125 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 C10orf105Q8TEF2 133 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 IGHV3-23P01764 117 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 HLA-DRB4P13762 266 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 UBE2E1P51965 193 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 BRD3OSQ6XYD6 125 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 PIMREGQ9BSJ6 248 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 HLA-DRB4X5D2U9 266 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 IGLV2-18A0A075B6J9 118 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 IGHV3OR16-8A0A075B7F1 116 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 TRAV26-2A0A0B4J265 109 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 CENPVL3A0A0U1RRI6 287 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 ATP5LO75964 103 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 IGHG4P01861 327 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 COX8CQ7Z4L0 72 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 NFE4Q86UQ8 179 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 GLMPQ8WWB7 406 aa11.74□□□□□ -0.53
LRRTM1-201ENST00000295057 TRGV3P03979 118 aa11.73□□□□□ -0.53
LRRTM1-201ENST00000295057 ERCC8Q13216 396 aa11.73□□□□□ -0.53
LRRTM1-201ENST00000295057 SHISA2Q6UWI4 295 aa11.73□□□□□ -0.53
LRRTM1-201ENST00000295057 MINOS1Q5TGZ0 78 aa11.73□□□□□ -0.53
LRRTM1-201ENST00000295057 CFAP126Q5VTH2 177 aa11.73□□□□□ -0.53
LRRTM1-201ENST00000295057 Q8N6K4 173 aa11.73□□□□□ -0.53
LRRTM1-201ENST00000295057 MINOS1-NBL1R4GNA1 71 aa11.73□□□□□ -0.53
LRRTM1-201ENST00000295057 SMCPP49901 116 aaPredicted RBP11.72□□□□□ -0.53
LRRTM1-201ENST00000295057 Q8N8P6 123 aa11.72□□□□□ -0.53
LRRTM1-201ENST00000295057 TRBV7-3A0A075B6L6 115 aa11.72□□□□□ -0.53
LRRTM1-201ENST00000295057 SFTA2Q6UW10 78 aa11.72□□□□□ -0.53
LRRTM1-201ENST00000295057 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
LRRTM1-201ENST00000295057 SMAD5-AS1Q9Y6J3 95 aa11.72□□□□□ -0.53
LRRTM1-201ENST00000295057 B5MCH6 92 aa11.71□□□□□ -0.53
LRRTM1-201ENST00000295057 NPFFO15130 113 aa11.71□□□□□ -0.53
LRRTM1-201ENST00000295057 MORN3Q6PF18 240 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms