RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TM2D2Q9BX73 214 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 HIGD1BQ9P298 99 aa12.39□□□□□ -0.43
PRPF40B-201ENST00000261897 TEX22C9J3V5 150 aa12.38□□□□□ -0.43
PRPF40B-201ENST00000261897 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
PRPF40B-201ENST00000261897 ANKRD29Q8N6D5 301 aa12.38□□□□□ -0.43
PRPF40B-201ENST00000261897 NBR2O15453 112 aa12.38□□□□□ -0.43
PRPF40B-201ENST00000261897 NTN5Q8WTR8 489 aaPredicted RBP12.38□□□□□ -0.43
PRPF40B-201ENST00000261897 SPATA25Q9BR10 227 aa12.38□□□□□ -0.43
PRPF40B-201ENST00000261897 TRAV12-3A0A0B4J271 114 aa12.38□□□□□ -0.43
PRPF40B-201ENST00000261897 HERV-K104P63124 156 aa12.38□□□□□ -0.43
PRPF40B-201ENST00000261897 ZNF493Q6ZR52 646 aa12.38□□□□□ -0.43
PRPF40B-201ENST00000261897 RAB1BQ9H0U4 201 aa12.37□□□□□ -0.43
PRPF40B-201ENST00000261897 K7EM74 188 aa12.37□□□□□ -0.43
PRPF40B-201ENST00000261897 LGALS1P09382 135 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-201ENST00000261897 GAGE5Q13069 117 aa12.37□□□□□ -0.43
PRPF40B-201ENST00000261897 GAGE6Q13070 117 aa12.37□□□□□ -0.43
PRPF40B-201ENST00000261897 RNF185Q96GF1 192 aa12.37□□□□□ -0.43
PRPF40B-201ENST00000261897 RNASE4P34096 147 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 LAMA5O15230 3695 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 IGHV3OR16-10A0A075B7F0 116 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 A0A087WWL8 130 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 TMEM30BQ3MIR4 351 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 SEM1Q6ZVN7 128 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 TECTAO75443 2155 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 TCL1BO95988 128 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 TCF15Q12870 199 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 LYPD1Q8N2G4 141 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 OR11H6Q8NGC7 330 aa12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-201ENST00000261897 IGF2RP11717 2491 aa12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 TSPAN13O95857 204 aa12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 C15orf32Q32M92 178 aa12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 RNASE6Q93091 150 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 ZNF688P0C7X2 276 aa12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 GATA4P43694 442 aa12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 TNRC6BQ9UPQ9 1833 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 IGKV3D-20A0A0C4DH25 116 aa12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 ZZEF1O43149 2961 aa12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 TCTEX1D4Q5JR98 221 aa12.35□□□□□ -0.43
PRPF40B-201ENST00000261897 SLC25A20O43772 301 aa12.34□□□□□ -0.43
PRPF40B-201ENST00000261897 TMEM95Q3KNT9 176 aa12.34□□□□□ -0.43
PRPF40B-201ENST00000261897 ASCL5Q7RTU5 278 aa12.34□□□□□ -0.43
PRPF40B-201ENST00000261897 LINC01560Q8TB33 94 aa12.34□□□□□ -0.43
PRPF40B-201ENST00000261897 AGPAT4-IT1Q9H0P7 198 aa12.34□□□□□ -0.43
PRPF40B-201ENST00000261897 DPM3Q9P2X0 92 aa12.34□□□□□ -0.43
PRPF40B-201ENST00000261897 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
PRPF40B-201ENST00000261897 IGHG3P01860 377 aa12.33□□□□□ -0.44
PRPF40B-201ENST00000261897 SUMO2P61956 95 aaKnown RBP12.33□□□□□ -0.44
PRPF40B-201ENST00000261897 TEN1Q86WV5 123 aa12.33□□□□□ -0.44
PRPF40B-201ENST00000261897 SMIM2Q9BVW6 85 aa12.33□□□□□ -0.44
PRPF40B-201ENST00000261897 LRBAP50851 2863 aa12.33□□□□□ -0.44
PRPF40B-201ENST00000261897 RPL39P62891 51 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-201ENST00000261897 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
PRPF40B-201ENST00000261897 IGF1P05019 195 aa12.32□□□□□ -0.44
PRPF40B-201ENST00000261897 TP53TG1Q9Y2A0 90 aa12.32□□□□□ -0.44
PRPF40B-201ENST00000261897 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
PRPF40B-201ENST00000261897 SPENQ96T58 3664 aaKnown RBP12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 SVIPQ8NHG7 77 aa12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 LINC00477Q96M19 166 aa12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 ERG28Q9UKR5 140 aa12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 FAM215AQ9Y5M1 114 aa12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 F6UB75 175 aa12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 FCN3O75636 299 aa12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 IGHV3-11P01762 117 aa12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 ORMDL2Q53FV1 153 aa12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 CDIP1Q9H305 208 aa12.31□□□□□ -0.44
PRPF40B-201ENST00000261897 TRAV8-4A0A0B4J246 113 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 CCDC179H3BU77 68 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 ZNF56Q15929 161 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 CFAP126Q5VTH2 177 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 UBTD1Q9HAC8 227 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 C11orf21Q9P2W6 132 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 G3V318 75 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 PDE6HQ13956 83 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 U3KQK5 164 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 RAI1Q7Z5J4 1906 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 TLN2Q9Y4G6 2542 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 GAGE12JA6NER3 117 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 GAGE7O76087 117 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 GAGE12FP0CL80 117 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 GAGE12GP0CL81 117 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 GAGE12IP0CL82 117 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 CD59P13987 128 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 GAGE4Q13068 117 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 METTL26Q96S19 204 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 PCSK5Q92824 1860 aa12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-201ENST00000261897 TRAV4A0A0B4J268 109 aa12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 SMCPP49901 116 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 PSMG4Q5JS54 123 aa12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 OPRPNQ99935 248 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 TMEM262E9PQX1 116 aa12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 RS1O15537 224 aa12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 C5orf64Q2M2E5 130 aa12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 RNASE13Q5GAN3 156 aaKnown RBP12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 C15orf53Q8NAA6 179 aa12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 IGLC6P0CF74 106 aa12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 FHL3Q13643 280 aa12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 TAL2Q16559 108 aa12.29□□□□□ -0.44
PRPF40B-201ENST00000261897 FAM159AQ6UWV7 190 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms