RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Tmem129Q8K304 362 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 P2ry6Q9ERK9 328 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Ighv6-4A0A0A6YX19 119 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm45871A0A1B0GRI9 540 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Igsf11P0C673 428 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Wdr82Q8BFQ4 313 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Fam53bQ8BGR5 422 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm10190Q8BSD7 107 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Vmn1r235Q8R297 328 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Zfp959Q91VM8 539 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Foxa2P35583 459 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Fam219bQ14DQ1 197 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Prss33Q80WM7 277 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Dnase2bQ9QY48 354 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Thsd7aQ69ZU6 1645 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm45783A0A1B0GT48 74 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Cdx1P18111 268 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Foxa3P35584 353 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Cd200r4Q6XJV4 270 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 NracQ8BNX7 165 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Q9CQM1 111 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Ighv5-9A0A075B5Q2 117 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm20773A0A0A6YXW2 232 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm20807A0A0A6YXX7 232 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm20873J3QMQ9 232 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm20795J3QP49 232 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Dlx6P70397 175 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm21440Q3TTD8 232 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Rita1Q9D1H0 253 aa10.01□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Igkv15-103A0A140T8P3 115 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Trav12-1A0N8R1 115 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Olfr749E9Q438 313 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Olfr235E9Q9Z6 312 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 P06344 263 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Rnase9P60154 184 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Mrgprb2Q3KNA1 338 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Prss44Q402U7 372 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Trav15-1-dv6-1Q5R1D2 117 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Ovol2Q8CIV7 274 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 V1ra8Q9EQ48 279 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Trbv15A0A0A6YYE3 115 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Sc5dO88822 299 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Tcrg-V1P06325 135 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 HrkP62816 92 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Tbr1Q64336 681 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 H2al3Q9D4U4 128 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Klk1b27Q9JM71 263 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm10665K7N6B7 321 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Itgb1bp1O35671 200 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Olfr399Q7TRX3 311 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Ndufb8Q9D6J5 186 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 F11rO88792 300 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Nutf2P61971 127 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm21394Q497R7 227 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Olfr1380Q7TQT5 311 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Tmem219Q9D123 240 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Hdgfl3Q9JMG7 202 aa10□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm44501A8R0T9 150 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Q149G0 166 aaKnown RBP9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Xaf1Q5NBU8 273 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 5930422O12RikQ8C4Y4 123 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Klf7Q99JB0 301 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 MosP00536 390 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Defa-rs7P50715 91 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Loxl2P58022 776 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Olfr1209Q3SXJ3 310 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Lrcol1Q3URS3 161 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Psg27Q497W2 474 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Cphx2Q8BX39 182 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Il1f10Q8R459 152 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 RetnQ99P87 114 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Atxn7l1Q9CZ05 146 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Rpl36-ps4A0A140T8U4 117 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Zfp764E9QAP1 431 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Scgb1b19F6WYW0 93 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Tmem40Q4FJU9 225 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Ss18Q62280 418 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Lrp10Q7TQH7 713 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Cox6cQ9CPQ1 76 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Fmc1Q9CR13 113 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Lipt2Q9D009 231 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 EsdQ9R0P3 282 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 TriobpQ99KW3 2014 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Defa-rs2P17534 91 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Sox21Q811W0 276 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 March11Q8CBH7 400 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Tmem50aQ9CXL1 157 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 PatjQ63ZW7 1834 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Ighv8-9A0A0G2JET1 119 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Olfr556E9Q549 324 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Thap8E9Q695 213 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Cr2P19070 1025 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Defa23Q5G866 93 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Rasl11aQ6IMB1 242 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Olfr1199Q8VF94 310 aa9.99□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Zfp950A0A0U1RQ46 609 aa9.98□□□□□ -0.81
Scn8a-208ENSMUST00000200963 P01667 111 aa9.98□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Defa-rs12P50716 91 aa9.98□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Eif4ebp2P70445 120 aa9.98□□□□□ -0.81
Scn8a-208ENSMUST00000200963 Gm12888Q3UW77 119 aa9.98□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms