RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Spaca3Q9D9X8 221 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Fgf16Q9ESL8 207 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1118A0A0J9YUE7 307 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm10428J3QNV7 132 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 DdtO35215 118 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gstp2P46425 210 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Zfp72Q0VFY0 435 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tmem256Q5F285 113 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 NotoQ5TIS6 240 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Rnf182Q8C432 247 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1228Q8VGM9 323 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cacng8Q8VHW2 423 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 GgactQ923B0 149 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Rnd2Q9QYM5 227 aa9.93□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1185-ps1F6XP16 303 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gosr1O88630 250 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cd226Q8K4F0 333 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1441Q8VFV3 318 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Q9CQM1 111 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cldn10Q9Z0S6 231 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tnfaip6O08859 275 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Rpl23P62830 140 aaKnown RBP9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Q3UZV7 1028 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 C1ql4Q4ZJM9 238 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cd200r1lQ6XJV6 249 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr965Q7TRA7 312 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Nhlrc3Q8CCH2 347 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr481Q8VGI5 312 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1256Q8VGP1 306 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 MmdQ9CQY7 238 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gpa33Q9JKA5 319 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Cep350E9Q309 3095 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Wdr81Q5ND34 1934 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm6993A0A1W2P738 69 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Sp9Q64HY3 484 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Vgll4Q80V24 287 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Myo16Q5DU14 1919 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Igh-3P01867 404 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 P18533 117 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Zfp936Q3ULA8 456 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr16Q62007 309 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Fam19a2Q7TPG7 131 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Aifm1Q9Z0X1 612 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Scn10aQ6QIY3 1958 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Mcm3apQ9WUU9 1971 aa9.92□□□□□ -0.82
Ndc1-204ENSMUST00000139560 AsmtD3KU66 387 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Zic3Q62521 466 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 PnkdQ69ZP3 385 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr976Q8VF15 326 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr961Q9EQ84 314 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Ighv5-9A0A075B5Q2 117 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm39566A0A1B0GT45 1251 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm45783A0A1B0GT48 74 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Il22ra1Q80XZ4 581 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 BmfQ91ZE9 185 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tmem160Q9D938 188 aa9.91□□□□□ -0.82
Ndc1-204ENSMUST00000139560 PtprdQ64487 1912 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm14548E9Q1Z6 680 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Klf12O35738 402 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Igsf11P0C673 428 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Srp14P16254 110 aaKnown RBP9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Ccsmst1Q6RUT7 136 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tmem140Q8BGY5 185 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Zfp119bQ8K0G9 543 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tm4sf20Q9CQY8 226 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Prss30Q9QYZ9 310 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm19410A0A140LJC7 2098 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Tmem116A0A0G2JGD3 401 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm21616B6ZB74 166 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Zfp976E9Q981 636 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Pate4Q09098 99 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Gm9945Q8BNZ3 91 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Rbm14Q8C2Q3 669 aaKnown RBP9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr958Q8VEY3 312 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Hspb8Q9JK92 196 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Fam89bQ9QUI1 189 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 CcsQ9WU84 274 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Lamb2Q61292 1799 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Ccl11P48298 97 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 AgaQ64191 346 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Mbnl3Q8R003 342 aaKnown RBP9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr593Q8VF28 327 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Pth2Q91W27 100 aa9.9□□□□□ -0.82
Ndc1-204ENSMUST00000139560 Olfr1245A0A1L1SQJ6 307 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Vmn1r232A2RTT5 351 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Nkx2-8O70584 235 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Nkain3Q3URJ8 181 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Hist3h2bbQ8CGP0 126 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Habp2Q8K0D2 558 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 RpeQ8VEE0 228 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Smim8Q9CQQ0 97 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Hist3h2baQ9D2U9 126 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Exph5Q0VAV2 1960 aa9.9□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Rp1P56716 2095 aa9.89□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Dennd4aE9Q8V6 1869 aa9.89□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Igkv6-25A0A140T8N7 115 aa9.89□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Klri1B2KG20 248 aa9.89□□□□□ -0.83
Ndc1-204ENSMUST00000139560 AponG3X9D6 251 aa9.89□□□□□ -0.83
Ndc1-204ENSMUST00000139560 A630076J17RikJ3QQ32 107 aa9.89□□□□□ -0.83
Ndc1-204ENSMUST00000139560 Dynlt3P56387 116 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms