RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Slc25a35Q5SWT3 300 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Tbr1Q64336 681 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Olfr761Q7TRJ0 323 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Olfr553Q7TRS6 326 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ubr3Q5U430 1889 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Grem1O70326 184 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm21394Q497R7 227 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Cox6cQ9CPQ1 76 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Defa1P11477 93 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Defa-rs12P50716 91 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Znhit1Q8R331 154 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Mettl26Q9DCS2 204 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Trav16A0A075B653 116 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Zfp950A0A0U1RQ46 609 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Cited2O35740 269 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Xaf1Q5NBU8 273 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Slc35d2Q762D5 326 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Olfr1382Q7TQT3 311 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Psg22Q810J1 475 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Olfr223Q8VF69 319 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Tmem126aQ9D8Y1 196 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 BC030500E9Q6W0 185 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 LgalslbQ7TPX9 165 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 GgactQ923B0 149 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Atp5lQ9CPQ8 103 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 D730048I06RikQ9CQB8 106 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ccl2P10148 148 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ucp2P70406 309 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 9330161L09RikQ9D253 136 aa11.88□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm6525A0A0A6YW33 106 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Cdkn1bP46414 197 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Khdc1cQ4KL78 166 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Dirc2Q8BFQ6 478 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Zfp119bQ8K0G9 543 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Shisal2bQ9D1Y9 158 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Fam53aE9PV82 402 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Otx1P80205 355 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Defa20Q45VN2 95 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Lamb2Q61292 1799 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Trav7-5A0A0G2JFX6 112 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 P04212 136 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Mrpl51Q9CPY1 128 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Fmc1Q9CR13 113 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 MNCb-2875Q9DCB3 74 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Igkv4-91A0A075B5L2 119 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm21882J3QN86 361 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Tspan7Q62283 249 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 D630044L22RikQ8C701 164 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ormdl3Q9CPZ6 153 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Avpi1Q9D7H4 142 aa11.87□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ly6g6fB2RXM6 300 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 P06344 263 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 TbpP29037 316 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Nkain3Q3URJ8 181 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 GgnQ80WJ1 673 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Zfp976E9Q981 636 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 GzmbP04187 247 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 CampP51437 172 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Tac3P55099 116 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Prss28Q924N9 274 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Igh-3P01867 404 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 CxadrP97792 365 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Neurl3Q8CJC5 254 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Slc35e4Q8K3D6 351 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 NacaP70670 2187 aaKnown RBP11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ighv8-9A0A0G2JET1 119 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 H2-DMb2Q31099 261 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 NrapQ80XB4 1728 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 H2-M10.4Q85ZW8 331 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 BC106179Q8C9L1 186 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 1700013G24RikQ9DAC6 286 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ighv7-3A0A075B5R2 120 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Olfr235E9Q9Z6 312 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 SptbP15508 2128 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Defa2P28309 93 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Rpl23P62830 140 aaKnown RBP11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Prss46Q5M8S2 314 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Prr23a3Q9CWP9 254 aa11.86□□□□□ -0.51
Col3a1-201ENSMUST00000087883 TracA0A075B662 137 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Trav3n-3A0A0G2JEM0 114 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Trbv17A0A140T8P8 114 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 OdamA1E960 273 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Tnfrsf9P20334 256 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Tmem42Q9CR22 157 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Klk1b27Q9JM71 263 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm5615Q3UW02 101 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Q8CF25 301 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ndufb8Q9D6J5 186 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Togaram1Q6A070 1776 aaKnown RBP11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Efnb1P52795 345 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 St6galnac2P70277 373 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Cphx2Q8BX39 182 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Nrn1Q8CFV4 142 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Slurp1Q9Z0K7 110 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Igkv14-100A0A0G2JG36 117 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Frrs1lB1AXV0 293 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm21913J3KML9 361 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm21776J3QPJ5 361 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Cd8bP10300 213 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Foxa2P35583 459 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms