RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gvin1Q80SU7 2427 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Esp6A8R0U0 136 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 P01796 113 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 P01797 113 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 P01799 113 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr143P34985 313 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Smim7Q5RKS2 75 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Gm10334Q792Y8 246 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Pld4Q8BG07 503 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 IqcjQ8BPW0 110 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Ankrd33Q8BXP5 385 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr470Q8VF65 314 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Cmtm2bQ9DAC0 210 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Gpr35Q9ES90 307 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Trbv13-3A0A0B4J1H2 113 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Ifna4P07351 186 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Nutf2P61971 127 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 H2-M10.4Q85ZW8 331 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Fam174bQ8K064 153 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 MavsQ8VCF0 503 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Znrf1Q91V17 227 aa13.55□□□□□ -0.24
Shh-201ENSMUST00000002708 Gm8653K9J7G2 307 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Vmn1r117L7N2C9 307 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Tff3Q62395 81 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Pef1Q8BFY6 275 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr736Q8VFT6 312 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 MNCb-2875Q9DCB3 74 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 DscamQ9ERC8 2013 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Ncor1Q60974 2453 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Gm20422E9PUR3 255 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr779E9PUS9 130 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Prss32E9Q409 334 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Gm2381G3UY53 305 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 P01789 122 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 P04946 108 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Patz1Q5NBY9 687 aaKnown RBP13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Vmn1r237Q8R296 289 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Actl6bQ99MR0 426 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Crim1Q9JLL0 1037 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Prss30Q9QYZ9 310 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Igkv1-132A0A0B4J1H9 120 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Nat8f7E0CYR6 227 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 MyadmO35682 320 aaKnown RBP13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr1408Q8VG32 310 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Lmntd1Q9D4C1 413 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 CcsQ9WU84 274 aa13.54□□□□□ -0.24
Shh-201ENSMUST00000002708 Ighv9-2A0A0B4J1J4 117 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Igkv1-131A0A140T8M8 120 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Frrs1lB1AXV0 293 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Gm6665F6Y363 85 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Gpr12P35412 334 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Ubald1Q6P3B2 176 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr1246Q7TQZ6 314 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Uqcc3Q8K2T4 89 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr346Q8VGJ7 309 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 A630076J17RikJ3QQ32 107 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 P04212 136 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Zfp936Q3ULA8 456 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Taar4Q5QD15 347 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Rab4bQ91ZR1 213 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Arl13aQ9D416 372 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 TslpQ9JIE6 140 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Slc25a15Q9WVD5 301 aa13.53□□□□□ -0.24
Shh-201ENSMUST00000002708 Foxi3E0CZH3 425 aa13.52□□□□□ -0.24
Shh-201ENSMUST00000002708 Gm5218F6YH22 154 aa13.52□□□□□ -0.24
Shh-201ENSMUST00000002708 Lgals9O08573 353 aaKnown RBP13.52□□□□□ -0.24
Shh-201ENSMUST00000002708 Zfp58P16372 489 aa13.52□□□□□ -0.24
Shh-201ENSMUST00000002708 Atp5g2P56383 146 aa13.52□□□□□ -0.24
Shh-201ENSMUST00000002708 Rpl31P62900 125 aaKnown RBP13.52□□□□□ -0.24
Shh-201ENSMUST00000002708 Sap30lQ5SQF8 182 aa13.52□□□□□ -0.24
Shh-201ENSMUST00000002708 Prelid1Q8R107 217 aa13.52□□□□□ -0.24
Shh-201ENSMUST00000002708 Trbv1A0A0B4J1G7 116 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Ighv8-9A0A0G2JET1 119 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Zfp825A0A1Y7VK00 292 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 P01787 123 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Il3raP26952 396 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm10775Q3V290 127 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Prss44Q402U7 372 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Spcs3Q6ZWQ7 180 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Gucd1Q8BZI6 239 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr1184Q8VG86 311 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr983Q8VG90 315 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 CenpmQ9CQA0 180 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 4931428L18RikQ9D4S9 127 aa13.52□□□□□ -0.25
Shh-201ENSMUST00000002708 Gm3045A0A1D5RMA1 209 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Cldn34c4A2ANA3 212 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Gata2O09100 480 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Pde6dO55057 150 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Tnfrsf17O88472 185 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 NgfP01139 241 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 S100a10P08207 97 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Fam3dP97805 223 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Olfr972Q9EQA2 314 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Dscaml1Q4VA61 2053 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Ighv1-26A0A075B5V0 117 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Fgf5P15656 264 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Pear1Q8VIK5 1034 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Pam16Q9CQV1 125 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Ccl28Q9JIL2 130 aa13.51□□□□□ -0.25
Shh-201ENSMUST00000002708 Scgb3a2Q920H1 91 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 138.9 ms