RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 AKAIN1P0CW23 69 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 CRYGSP22914 178 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 NFYAP23511 347 aaPredicted RBP1.9□□□□□ -2.11
CPNE3-213ENST00000622183 ZNF93P35789 620 aaPredicted RBP1.9□□□□□ -2.11
CPNE3-213ENST00000622183 SNCAP37840 140 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 Q0VG73 95 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 KLRD1Q13241 179 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 BCL2L15Q5TBC7 163 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 ZNF720Q7Z2F6 126 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 EXOC3-AS1Q8N2X6 119 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 KCNRGQ8N5I3 272 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 OR51A4Q8NGJ6 313 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 OR10AC1Q8NH08 325 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 ATP6V0E2Q8NHE4 81 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 SLC25A40Q8TBP6 338 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 MAGOHBQ96A72 148 aaKnown RBP1.9□□□□□ -2.11
CPNE3-213ENST00000622183 DERL1Q9BUN8 251 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 CCDC167Q9P0B6 97 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 COMMD3Q9UBI1 195 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 SOX21Q9Y651 276 aaPredicted RBP1.9□□□□□ -2.11
CPNE3-213ENST00000622183 NWD2Q9ULI1 1742 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 HMGXB3Q12766 1538 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 KIAA0586Q9BVV6 1533 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 PDCD11Q14690 1871 aaKnown RBP1.9□□□□□ -2.11
CPNE3-213ENST00000622183 ANKARQ7Z5J8 1434 aa1.9□□□□□ -2.11
CPNE3-213ENST00000622183 SAMD9Q5K651 1589 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 MON2Q7Z3U7 1717 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 PLIN4Q96Q06 1357 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 USP32Q8NFA0 1604 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 TRAV9-1A0A075B6T8 112 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 TRBV10-2A0A0K0K1G8 114 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 RIIAD1A6NNX1 92 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 TMEM262E9PQX1 116 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 ZNF670-ZNF695F2Z2N8 137 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 RER1O15258 196 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 IGKV1-5P01602 117 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 LINC00694P0DN24 101 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST1H2BOP23527 126 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST1H2BBP33778 126 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 FXYD2P54710 66 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST1H2BDP58876 126 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 S100A10P60903 97 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST1H2BCP62807 126 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 PLGLB1Q02325 96 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST2H2BEQ16778 126 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 TMEM155Q4W5P6 130 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.89□□□□□ -2.11
CPNE3-213ENST00000622183 FAM27BQ5VT28 67 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 MRPL54Q6P161 138 aaKnown RBP1.89□□□□□ -2.11
CPNE3-213ENST00000622183 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
CPNE3-213ENST00000622183 ATOH7Q8N100 152 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 C10orf111Q8N326 155 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST1H2BHQ93079 126 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST1H2BNQ99877 126 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST1H2BMQ99879 126 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 HIST1H2BLQ99880 126 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 DPY30Q9C005 99 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 AMMECR1Q9Y4X0 333 aaPredicted RBP1.89□□□□□ -2.11
CPNE3-213ENST00000622183 LINC00312Q9Y6C7 94 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 RGS12O14924 1447 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 MYOM1P52179 1685 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 ARHGAP32A7KAX9 2087 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 NWD1Q149M9 1564 aa1.89□□□□□ -2.11
CPNE3-213ENST00000622183 FBN1P35555 2871 aaKnown RBP1.88□□□□□ -2.11
CPNE3-213ENST00000622183 XRN1Q8IZH2 1706 aaKnown RBP1.88□□□□□ -2.11
CPNE3-213ENST00000622183 CC2D2AQ9P2K1 1620 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 HEATR5AQ86XA9 2040 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 ATP7AQ04656 1500 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 PTPRDP23468 1912 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 MYO18AQ92614 2054 aaKnown RBP1.88□□□□□ -2.11
CPNE3-213ENST00000622183 ZNF142P52746 1687 aaPredicted RBP1.88□□□□□ -2.11
CPNE3-213ENST00000622183 IGKV1D-43A0A0B4J1Z2 117 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 TCRBV3S1A0A5B6 114 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 C7orf71A4D174 169 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 DPRXA6NFQ7 191 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 CCDC179H3BU77 68 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 ZNF737O75373 536 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 ATP5G3P48201 142 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 AQP4P55087 323 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 TPPP2P59282 170 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 UBA52P62987 128 aaKnown RBP1.88□□□□□ -2.11
CPNE3-213ENST00000622183 QRFPP83859 136 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 MYL5Q02045 173 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 EIF3IQ13347 325 aaKnown RBP1.88□□□□□ -2.11
CPNE3-213ENST00000622183 HMGN3Q15651 99 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 RRN3P1Q2M238 152 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 Q6AWC8 147 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 LCN15Q6UWW0 184 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 HRCT1Q6UXD1 115 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 RPS19BP1Q86WX3 136 aaKnown RBP1.88□□□□□ -2.11
CPNE3-213ENST00000622183 CARD19Q96LW7 228 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 ADAT1Q9BUB4 502 aaKnown RBP1.88□□□□□ -2.11
CPNE3-213ENST00000622183 BET1LQ9NYM9 111 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 PATJQ8NI35 1801 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 SCN9AQ15858 1988 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 CFTRP13569 1480 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 LRRC9Q6ZRR7 1453 aa1.88□□□□□ -2.11
CPNE3-213ENST00000622183 CASP8AP2Q9UKL3 1982 aa1.87□□□□□ -2.11
CPNE3-213ENST00000622183 SCN8AQ9UQD0 1980 aa1.87□□□□□ -2.11
CPNE3-213ENST00000622183 LOC107984640A0A0U1RRK4 108 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms