RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 TLX1NBP0CAT3 122 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 C8orf88P0DMB2 117 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 LINC00694P0DN24 101 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 MGST1P10620 155 aaKnown RBP3.35□□□□□ -1.87
SS18-223ENST00000583595 ZNF823P16415 610 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 RPL7P18124 248 aaKnown RBP3.35□□□□□ -1.87
SS18-223ENST00000583595 ORM2P19652 201 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 RPS27P42677 84 aaKnown RBP3.35□□□□□ -1.87
SS18-223ENST00000583595 INSL3P51460 131 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 EMP1P54849 157 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 TNFAIP6P98066 277 aaPredicted RBP3.35□□□□□ -1.87
SS18-223ENST00000583595 EDDM3AQ14507 147 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 PMVKQ15126 192 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 RTL8BQ17RB0 113 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 TBC1D28Q2M2D7 210 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 LYRM7Q5U5X0 104 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 TMEM14EPQ6UXP3 125 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 FAM19A5Q7Z5A7 132 aaPredicted RBP3.35□□□□□ -1.87
SS18-223ENST00000583595 MARCH3Q86UD3 253 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 NUP35Q8NFH5 326 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 LINC01587Q99440 93 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 PBOV1Q9GZY1 135 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 HIGD1AQ9Y241 93 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 MPC1Q9Y5U8 109 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 LHFPL6Q9Y693 200 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 LTBP2Q14767 1821 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 KMT2EQ8IZD2 1858 aa3.35□□□□□ -1.87
SS18-223ENST00000583595 ANAPC1Q9H1A4 1944 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 MDC1Q14676 2089 aaKnown RBP3.34□□□□□ -1.87
SS18-223ENST00000583595 ABCA7Q8IZY2 2146 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 IGKV1D-42A0A075B6H8 117 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 IGLV11-55A0A075B6I3 123 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 CXorf51AA0A1B0GTR3 108 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 A0A1B0GXF2 115 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 C5orf63A6NC05 138 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 A6NDX4 124 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 NPFFO15130 113 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 PDCD6O75340 191 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 OR2H2O95918 312 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 IGLV2-8P01709 118 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 IGHMP01871 453 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 HLA-DRB4P13762 266 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 CCL1P22362 96 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 UBE2AP49459 152 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 PSMB2P49721 201 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 PRDX1Q06830 199 aaKnown RBP3.34□□□□□ -1.87
SS18-223ENST00000583595 RPL18Q07020 188 aaKnown RBP3.34□□□□□ -1.87
SS18-223ENST00000583595 HES1Q14469 280 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 RRN3P1Q2M238 152 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 LGALS9BQ3B8N2 356 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 CFAP126Q5VTH2 177 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 LGALS9CQ6DKI2 356 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 Q6P435 159 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 SSX8Q7RTT4 187 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 TEN1Q86WV5 123 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 Q8N9W7 124 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 PRADC1Q9BSG0 188 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 OR2H1Q9GZK4 316 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 FGF23Q9GZV9 251 aaPredicted RBP3.34□□□□□ -1.87
SS18-223ENST00000583595 FBXL15Q9H469 300 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 Q9Y3F1 56 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 HLA-DRB4X5D2U9 266 aa3.34□□□□□ -1.87
SS18-223ENST00000583595 TTC28Q96AY4 2481 aa3.34□□□□□ -1.88
SS18-223ENST00000583595 DOCK3Q8IZD9 2030 aa3.34□□□□□ -1.88
SS18-223ENST00000583595 GTF3C1Q12789 2109 aa3.34□□□□□ -1.88
SS18-223ENST00000583595 CPAMD8Q8IZJ3 1885 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 TRBV20-1A0A075B6N2 111 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 A0A1B0GVX0 72 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 H3BP45 60 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 SPINK4O60575 86 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 RBP4P02753 201 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 CRYGDP07320 174 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 IAPPP10997 89 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 CSN1S1P47710 185 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 FXYD2P54710 66 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 C4orf26Q17RF5 130 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 FBXL19-AS1Q494R0 122 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 SPANXN5Q5MJ07 72 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 CLEC19AQ6UXS0 136 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 FAM231DQ6ZW35 169 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 C6orf201Q7Z4U5 140 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 SBSPONQ8IVN8 264 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 LINC00337Q8N6G1 96 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 OR11H6Q8NGC7 330 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 OR1L8Q8NGR8 309 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 NPCDR1Q9BY65 106 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 TAC3Q9UHF0 121 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 A0A0C4DFX4 3053 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 OBSL1O75147 1896 aa3.33□□□□□ -1.88
SS18-223ENST00000583595 COL6A3P12111 3177 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 IGHV6-1A0A0B4J1U7 121 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 IGHV5-51A0A0C4DH38 117 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 IGHV3-66A0A0C4DH42 116 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 TCRBV4S1A1TA0A5B7 111 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 A8MWL6 223 aa3.32□□□□□ -1.88
SS18-223ENST00000583595 RBM11P57052 281 aaKnown RBP3.32□□□□□ -1.88
SS18-223ENST00000583595 RPL30P62888 115 aaKnown RBP3.32□□□□□ -1.88
SS18-223ENST00000583595 KISS1Q15726 138 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms