RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 UBE2L3P68036 154 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-215ENST00000561187 ZNF415Q09FC8 603 aa18.53■□□□□ 0.56
SNRPA1-215ENST00000561187 KCNIP2Q9NS61 270 aa18.53■□□□□ 0.56
SNRPA1-215ENST00000561187 TNFRSF18Q9Y5U5 241 aa18.53■□□□□ 0.56
SNRPA1-215ENST00000561187 NMBP08949 121 aa18.52■□□□□ 0.56
SNRPA1-215ENST00000561187 SFTA3P0C7M3 94 aa18.52■□□□□ 0.56
SNRPA1-215ENST00000561187 BTF3P20290 206 aaKnown RBP18.52■□□□□ 0.56
SNRPA1-215ENST00000561187 NMES1Q9C002 83 aa18.52■□□□□ 0.56
SNRPA1-215ENST00000561187 SCRT2Q9NQ03 307 aa18.52■□□□□ 0.56
SNRPA1-215ENST00000561187 PRAF2O60831 178 aa18.51■□□□□ 0.55
SNRPA1-215ENST00000561187 Q6ZRN7 208 aaPredicted RBP18.51■□□□□ 0.55
SNRPA1-215ENST00000561187 PRO0255Q9UI72 69 aa18.51■□□□□ 0.55
SNRPA1-215ENST00000561187 RPH3ALQ9UNE2 315 aa18.51■□□□□ 0.55
SNRPA1-215ENST00000561187 C17orf112F2Z3M2 114 aa18.5■□□□□ 0.55
SNRPA1-215ENST00000561187 CSN1S1P47710 185 aa18.5■□□□□ 0.55
SNRPA1-215ENST00000561187 CRYBA4P53673 196 aa18.5■□□□□ 0.55
SNRPA1-215ENST00000561187 FFAR4Q5NUL3 377 aa18.5■□□□□ 0.55
SNRPA1-215ENST00000561187 Q8N1X5 172 aa18.5■□□□□ 0.55
SNRPA1-215ENST00000561187 SMIM3Q9BZL3 60 aa18.5■□□□□ 0.55
SNRPA1-215ENST00000561187 MDFICQ9P1T7 246 aa18.5■□□□□ 0.55
SNRPA1-215ENST00000561187 HHLA3Q9XRX5 114 aa18.5■□□□□ 0.55
SNRPA1-215ENST00000561187 FHL2Q14192 279 aa18.49■□□□□ 0.55
SNRPA1-215ENST00000561187 S100ZQ8WXG8 99 aa18.49■□□□□ 0.55
SNRPA1-215ENST00000561187 HYLS1Q96M11 299 aa18.49■□□□□ 0.55
SNRPA1-215ENST00000561187 ATP5SQ99766 215 aa18.49■□□□□ 0.55
SNRPA1-215ENST00000561187 NAGKQ9UJ70 344 aa18.49■□□□□ 0.55
SNRPA1-215ENST00000561187 TRGV4A0A0C4DH28 118 aa18.48■□□□□ 0.55
SNRPA1-215ENST00000561187 TMEM183BQ1AE95 376 aa18.48■□□□□ 0.55
SNRPA1-215ENST00000561187 TMEM183AQ8IXX5 376 aa18.48■□□□□ 0.55
SNRPA1-215ENST00000561187 UPK1BO75841 260 aa18.47■□□□□ 0.55
SNRPA1-215ENST00000561187 H2BFSP57053 126 aa18.47■□□□□ 0.55
SNRPA1-215ENST00000561187 PPP1R1CQ8WVI7 109 aa18.47■□□□□ 0.55
SNRPA1-215ENST00000561187 ZNF479Q96JC4 524 aa18.47■□□□□ 0.55
SNRPA1-215ENST00000561187 IFITM3Q01628 133 aa18.46■□□□□ 0.55
SNRPA1-215ENST00000561187 ZNF266Q14584 549 aa18.46■□□□□ 0.55
SNRPA1-215ENST00000561187 LYPD5Q6UWN5 251 aa18.46■□□□□ 0.55
SNRPA1-215ENST00000561187 INMT-MINDY4F8WBC2 141 aa18.45■□□□□ 0.54
SNRPA1-215ENST00000561187 MRPL23Q16540 153 aaKnown RBP18.45■□□□□ 0.54
SNRPA1-215ENST00000561187 DNAH10OSP0CZ25 163 aa18.44■□□□□ 0.54
SNRPA1-215ENST00000561187 KHDC3LQ587J8 217 aa18.44■□□□□ 0.54
SNRPA1-215ENST00000561187 HSPB11Q9Y547 144 aa18.44■□□□□ 0.54
SNRPA1-215ENST00000561187 RBAKDNA6NC62 111 aa18.43■□□□□ 0.54
SNRPA1-215ENST00000561187 DIRC3C9JPN6 131 aa18.43■□□□□ 0.54
SNRPA1-215ENST00000561187 SRIP30626 198 aa18.43■□□□□ 0.54
SNRPA1-215ENST00000561187 ERVFC1-1P60608 527 aa18.43■□□□□ 0.54
SNRPA1-215ENST00000561187 CYCSP99999 105 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-215ENST00000561187 NEGR1Q7Z3B1 354 aa18.43■□□□□ 0.54
SNRPA1-215ENST00000561187 WFDC10BQ8IUB3 73 aa18.43■□□□□ 0.54
SNRPA1-215ENST00000561187 TRBV7-9A0A0J9YWB2 115 aa18.42■□□□□ 0.54
SNRPA1-215ENST00000561187 K7EQD1 137 aa18.42■□□□□ 0.54
SNRPA1-215ENST00000561187 SSNA1O43805 119 aa18.42■□□□□ 0.54
SNRPA1-215ENST00000561187 GYPEP15421 78 aa18.42■□□□□ 0.54
SNRPA1-215ENST00000561187 SLAQ13239 276 aa18.42■□□□□ 0.54
SNRPA1-215ENST00000561187 FAM159AQ6UWV7 190 aa18.42■□□□□ 0.54
SNRPA1-215ENST00000561187 PCNPQ8WW12 178 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-215ENST00000561187 F6UZH7 168 aa18.41■□□□□ 0.54
SNRPA1-215ENST00000561187 IFNA5P01569 189 aa18.41■□□□□ 0.54
SNRPA1-215ENST00000561187 Q6AWC8 147 aa18.41■□□□□ 0.54
SNRPA1-215ENST00000561187 LYPD1Q8N2G4 141 aa18.41■□□□□ 0.54
SNRPA1-215ENST00000561187 SCGB1C1Q8TD33 95 aa18.41■□□□□ 0.54
SNRPA1-215ENST00000561187 TRGV11A0A075B6L2 103 aa18.4■□□□□ 0.54
SNRPA1-215ENST00000561187 MPC2O95563 127 aa18.4■□□□□ 0.54
SNRPA1-215ENST00000561187 TAS2R45P59539 299 aa18.4■□□□□ 0.54
SNRPA1-215ENST00000561187 LINC00299Q6ZSB3 139 aa18.4■□□□□ 0.54
SNRPA1-215ENST00000561187 LY96Q9Y6Y9 160 aa18.4■□□□□ 0.54
SNRPA1-215ENST00000561187 EREGO14944 169 aa18.39■□□□□ 0.53
SNRPA1-215ENST00000561187 GOLT1AQ6ZVE7 132 aa18.39■□□□□ 0.53
SNRPA1-215ENST00000561187 MBD2Q9UBB5 411 aa18.39■□□□□ 0.53
SNRPA1-215ENST00000561187 LOC100131303A0A0U1RQF7 123 aa18.38■□□□□ 0.53
SNRPA1-215ENST00000561187 PGPA6NDG6 321 aa18.38■□□□□ 0.53
SNRPA1-215ENST00000561187 HMGB3O15347 200 aaKnown RBP18.38■□□□□ 0.53
SNRPA1-215ENST00000561187 RPL12P30050 165 aaKnown RBP18.38■□□□□ 0.53
SNRPA1-215ENST00000561187 OR10G4Q8NGN3 311 aa18.38■□□□□ 0.53
SNRPA1-215ENST00000561187 CMTM2Q8TAZ6 248 aa18.38■□□□□ 0.53
SNRPA1-215ENST00000561187 TRAV8-1A0A0A6YYK1 113 aa18.37■□□□□ 0.53
SNRPA1-215ENST00000561187 GNRH2O43555 120 aa18.37■□□□□ 0.53
SNRPA1-215ENST00000561187 GNG5P63218 68 aa18.37■□□□□ 0.53
SNRPA1-215ENST00000561187 WFDC1Q9HC57 220 aa18.37■□□□□ 0.53
SNRPA1-215ENST00000561187 OTORQ9NRC9 128 aa18.37■□□□□ 0.53
SNRPA1-215ENST00000561187 IGHV3-16A0A0C4DH30 117 aa18.36■□□□□ 0.53
SNRPA1-215ENST00000561187 PET100P0DJ07 73 aa18.36■□□□□ 0.53
SNRPA1-215ENST00000561187 RAB2AP61019 212 aa18.36■□□□□ 0.53
SNRPA1-215ENST00000561187 RASL10AQ92737 203 aa18.36■□□□□ 0.53
SNRPA1-215ENST00000561187 SPXQ9BT56 116 aa18.36■□□□□ 0.53
SNRPA1-215ENST00000561187 OR4C5Q8NGB2 326 aa18.35■□□□□ 0.53
SNRPA1-215ENST00000561187 SGK494Q96LW2 274 aa18.35■□□□□ 0.53
SNRPA1-215ENST00000561187 LENEPQ9Y5L5 61 aa18.35■□□□□ 0.53
SNRPA1-215ENST00000561187 FAT1Q14517 4588 aa18.34■□□□□ 0.53
SNRPA1-215ENST00000561187 NFE4Q86UQ8 179 aa18.34■□□□□ 0.53
SNRPA1-215ENST00000561187 MARVELD1Q9BSK0 173 aa18.34■□□□□ 0.53
SNRPA1-215ENST00000561187 PTTG2Q9NZH5 202 aa18.34■□□□□ 0.53
SNRPA1-215ENST00000561187 MSRB1Q9NZV6 116 aa18.34■□□□□ 0.53
SNRPA1-215ENST00000561187 TRAV9-2A0A087WT02 112 aa18.33■□□□□ 0.52
SNRPA1-215ENST00000561187 A0A087WTM6 91 aa18.33■□□□□ 0.52
SNRPA1-215ENST00000561187 TRAV4A0A0B4J268 109 aa18.33■□□□□ 0.52
SNRPA1-215ENST00000561187 TYMSP04818 313 aa18.33■□□□□ 0.52
SNRPA1-215ENST00000561187 TVP23CQ96ET8 276 aa18.33■□□□□ 0.52
SNRPA1-215ENST00000561187 PGPEP1Q9NXJ5 209 aa18.33■□□□□ 0.52
SNRPA1-215ENST00000561187 A0A1W2PPV4 95 aa18.32■□□□□ 0.52
SNRPA1-215ENST00000561187 C9JCJ5 164 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms