RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 H7C1C5 153 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 KPNA4O00629 521 aaPredicted RBP-0.75□□□□□ -2.53
SNX6-204ENST00000555541 CDC42EP2O14613 210 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 SERPINA1P01009 418 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 APODP05090 189 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 TPT1P13693 172 aaKnown RBP-0.75□□□□□ -2.53
SNX6-204ENST00000555541 SDC4P31431 198 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 GLRXP35754 106 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 LCN6P62502 163 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 SPAG11BQ08648 103 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 CCL4L1Q8NHW4 92 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 PPP1R1CQ8WVI7 109 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 CPDO75976 1380 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 RTL9Q8NET4 1388 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 KIAA1107Q9UPP5 1409 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 CDK13Q14004 1512 aaKnown RBP-0.75□□□□□ -2.53
SNX6-204ENST00000555541 FAT2Q9NYQ8 4349 aa-0.75□□□□□ -2.53
SNX6-204ENST00000555541 ABCA1O95477 2261 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 PDZD2O15018 2839 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 GVQW2A0A096LPI5 108 aaPredicted RBP-0.76□□□□□ -2.53
SNX6-204ENST00000555541 M0R3E3 92 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 EDF1O60869 148 aaKnown RBP-0.76□□□□□ -2.53
SNX6-204ENST00000555541 PPP1R2P41236 205 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 GTF2A1P52655 376 aaPredicted RBP-0.76□□□□□ -2.53
SNX6-204ENST00000555541 ITGB3BPQ13352 177 aaPredicted RBP-0.76□□□□□ -2.53
SNX6-204ENST00000555541 WFDC2Q14508 124 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 RHOHQ15669 191 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 CCSMST1Q4G0I0 132 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 UNQ5815/PRO19632Q6UWF5 114 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 PHF5AQ7RTV0 110 aaKnown RBP-0.76□□□□□ -2.53
SNX6-204ENST00000555541 PHB2Q99623 299 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 PBDC1Q9BVG4 233 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 BET1LQ9NYM9 111 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 SSR3Q9UNL2 185 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 BLMP54132 1417 aaPredicted RBP-0.76□□□□□ -2.53
SNX6-204ENST00000555541 UHRF1BP1Q6BDS2 1440 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 CDK12Q9NYV4 1490 aaPredicted RBP-0.76□□□□□ -2.53
SNX6-204ENST00000555541 TRPM1Q7Z4N2 1603 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 PKD1L1Q8TDX9 2849 aa-0.76□□□□□ -2.53
SNX6-204ENST00000555541 TENM2Q9NT68 2774 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 ESPL1Q14674 2120 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 CAMSAP2Q08AD1 1489 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 ZNF670-ZNF695F2Z2N8 137 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 SAA1P0DJI8 122 aaPredicted RBP-0.77□□□□□ -2.53
SNX6-204ENST00000555541 FABP2P12104 132 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 CYBAP13498 195 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 RTL8BQ17RB0 113 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 AKR1C8PQ5T2L2 129 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 PTRHD1Q6GMV3 140 aaKnown RBP-0.77□□□□□ -2.53
SNX6-204ENST00000555541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 OR5H6Q8NGV6 325 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 SMIM11BQ8TCY0 68 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 DIRC1Q969H9 104 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 RTL8AQ9BWD3 113 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 CYP4F30PQ9H0H9 118 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 TAF9BQ9HBM6 251 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 C19orf12Q9NSK7 152 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 FKBP11Q9NYL4 201 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 PRNDQ9UKY0 176 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 PYCARDQ9ULZ3 195 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 ARL2BPQ9Y2Y0 163 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 MPC1Q9Y5U8 109 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 DOCK4Q8N1I0 1966 aa-0.77□□□□□ -2.53
SNX6-204ENST00000555541 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.78□□□□□ -2.53
SNX6-204ENST00000555541 CD109Q6YHK3 1445 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 ADCY9O60503 1353 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 TRAV12-2A0A075B6T6 113 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 IFITM5A6NNB3 132 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 H3BQV1 296 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 APOC1P02654 83 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 PYYP10082 97 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 ELOF1P60002 83 aaKnown RBP-0.78□□□□□ -2.53
SNX6-204ENST00000555541 OR5A2Q8NGI9 324 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 PRELID3AQ96N28 172 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 SMIM7Q9BQ49 75 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 SLC22A13Q9Y226 551 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 SPTBN2O15020 2390 aa-0.78□□□□□ -2.53
SNX6-204ENST00000555541 SPAG17Q6Q759 2223 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 TRAV17A0A0B4J275 112 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 TEX49A0A1B0GTD5 131 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 LOC107986453A0A1B0GWG9 222 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 CST2P09228 141 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 COX4I1P13073 169 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 MAXP61244 160 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 CCL7P80098 99 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 EMX2Q04743 252 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 AKIRIN2Q53H80 203 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 BORCS8Q96FH0 119 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 LYRM2Q9NU23 88 aaPredicted RBP-0.79□□□□□ -2.54
SNX6-204ENST00000555541 ARMC1Q9NVT9 282 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 IL20Q9NYY1 176 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 PRO0255Q9UI72 69 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 DOPEY2Q9Y3R5 2298 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 MED13LQ71F56 2210 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 LRP1BQ9NZR2 4599 aa-0.79□□□□□ -2.54
SNX6-204ENST00000555541 COL6A3P12111 3177 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 MAP1BP46821 2468 aaKnown RBP-0.8□□□□□ -2.54
SNX6-204ENST00000555541 RREB1Q92766 1687 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 ZNF815PA8K554 130 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 IFNA6P05013 189 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms