RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 LYPD5Q6UWN5 251 aa7.84□□□□□ -1.15
NEK3-204ENST00000552973 FXYD5Q96DB9 178 aa7.84□□□□□ -1.15
NEK3-204ENST00000552973 PHYHIPLQ96FC7 376 aa7.84□□□□□ -1.15
NEK3-204ENST00000552973 PRO0255Q9UI72 69 aa7.84□□□□□ -1.15
NEK3-204ENST00000552973 HHLA3Q9XRX5 114 aa7.84□□□□□ -1.15
NEK3-204ENST00000552973 H0YIZ8 118 aa7.83□□□□□ -1.16
NEK3-204ENST00000552973 EIF3GO75821 320 aaKnown RBP eCLIP7.83□□□□□ -1.16
NEK3-204ENST00000552973 NMBP08949 121 aa7.83□□□□□ -1.16
NEK3-204ENST00000552973 SFTA3P0C7M3 94 aa7.83□□□□□ -1.16
NEK3-204ENST00000552973 CCDC32Q9BV29 185 aa7.83□□□□□ -1.16
NEK3-204ENST00000552973 WDR61Q9GZS3 305 aaKnown RBP7.83□□□□□ -1.16
NEK3-204ENST00000552973 SLC25A31Q9H0C2 315 aa7.83□□□□□ -1.16
NEK3-204ENST00000552973 MDFICQ9P1T7 246 aa7.83□□□□□ -1.16
NEK3-204ENST00000552973 TRGV4A0A0C4DH28 118 aa7.82□□□□□ -1.16
NEK3-204ENST00000552973 OR7C2O60412 319 aa7.82□□□□□ -1.16
NEK3-204ENST00000552973 ZNF415Q09FC8 603 aa7.82□□□□□ -1.16
NEK3-204ENST00000552973 MRPL23Q16540 153 aaKnown RBP7.82□□□□□ -1.16
NEK3-204ENST00000552973 MZT2BQ6NZ67 158 aa7.82□□□□□ -1.16
NEK3-204ENST00000552973 ZNF479Q96JC4 524 aa7.82□□□□□ -1.16
NEK3-204ENST00000552973 EREGO14944 169 aa7.81□□□□□ -1.16
NEK3-204ENST00000552973 DNAH10OSP0CZ25 163 aa7.81□□□□□ -1.16
NEK3-204ENST00000552973 CSN1S1P47710 185 aa7.81□□□□□ -1.16
NEK3-204ENST00000552973 SLAQ13239 276 aa7.81□□□□□ -1.16
NEK3-204ENST00000552973 TMEM183BQ1AE95 376 aa7.81□□□□□ -1.16
NEK3-204ENST00000552973 NEGR1Q7Z3B1 354 aa7.81□□□□□ -1.16
NEK3-204ENST00000552973 TMEM183AQ8IXX5 376 aa7.81□□□□□ -1.16
NEK3-204ENST00000552973 HYLS1Q96M11 299 aa7.81□□□□□ -1.16
NEK3-204ENST00000552973 MRPL32Q9BYC8 188 aaKnown RBP7.81□□□□□ -1.16
NEK3-204ENST00000552973 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
NEK3-204ENST00000552973 C17orf112F2Z3M2 114 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 K7EQD1 137 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 SRIP30626 198 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 ERVFC1-1P60608 527 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 UBE2L3P68036 154 aaKnown RBP7.8□□□□□ -1.16
NEK3-204ENST00000552973 ZNF266Q14584 549 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 FFAR4Q5NUL3 377 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 WFDC10BQ8IUB3 73 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 ENKURQ8TC29 256 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 SMIM3Q9BZL3 60 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 NMES1Q9C002 83 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 NDUFA13Q9P0J0 144 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 NAGKQ9UJ70 344 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 RPH3ALQ9UNE2 315 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 LY96Q9Y6Y9 160 aa7.8□□□□□ -1.16
NEK3-204ENST00000552973 EPM2AB3EWF7 344 aa7.79□□□□□ -1.16
NEK3-204ENST00000552973 DIRC3C9JPN6 131 aa7.79□□□□□ -1.16
NEK3-204ENST00000552973 GNRH2O43555 120 aa7.79□□□□□ -1.16
NEK3-204ENST00000552973 GYPEP15421 78 aa7.79□□□□□ -1.16
NEK3-204ENST00000552973 XGP55808 180 aa7.79□□□□□ -1.16
NEK3-204ENST00000552973 ASAH1Q13510 395 aa7.79□□□□□ -1.16
NEK3-204ENST00000552973 FAM159AQ6UWV7 190 aa7.79□□□□□ -1.16
NEK3-204ENST00000552973 KCNIP2Q9NS61 270 aa7.79□□□□□ -1.16
NEK3-204ENST00000552973 TRAV9-2A0A087WT02 112 aa7.78□□□□□ -1.16
NEK3-204ENST00000552973 A0A087WTM6 91 aa7.78□□□□□ -1.16
NEK3-204ENST00000552973 TRBV7-9A0A0J9YWB2 115 aa7.78□□□□□ -1.16
NEK3-204ENST00000552973 PGPA6NDG6 321 aa7.78□□□□□ -1.16
NEK3-204ENST00000552973 KRTAP10-1P60331 282 aa7.78□□□□□ -1.16
NEK3-204ENST00000552973 LYPD1Q8N2G4 141 aa7.78□□□□□ -1.16
NEK3-204ENST00000552973 PCNPQ8WW12 178 aaKnown RBP7.78□□□□□ -1.16
NEK3-204ENST00000552973 PTTG2Q9NZH5 202 aa7.78□□□□□ -1.16
NEK3-204ENST00000552973 TRGV11A0A075B6L2 103 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 IGHV3-16A0A0C4DH30 117 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 RBAKDNA6NC62 111 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 INMT-MINDY4F8WBC2 141 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 EVI2AP22794 236 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 Q6AWC8 147 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 NFE4Q86UQ8 179 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 IQCF2Q8IXL9 164 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 OR10G4Q8NGN3 311 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 SCGB1C1Q8TD33 95 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 PPP1R1CQ8WVI7 109 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 RASL10AQ92737 203 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 ATP5SQ99766 215 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 SPXQ9BT56 116 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 MSRB1Q9NZV6 116 aa7.77□□□□□ -1.17
NEK3-204ENST00000552973 F6UZH7 168 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 IFNA5P01569 189 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 INAFM2P0DMQ5 153 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 H2BFSP57053 126 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 CYCSP99999 105 aaKnown RBP7.76□□□□□ -1.17
NEK3-204ENST00000552973 IFITM3Q01628 133 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 KHDC3LQ587J8 217 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 OR4C5Q8NGB2 326 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 CMTM2Q8TAZ6 248 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 S100ZQ8WXG8 99 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 SGK494Q96LW2 274 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 MBD2Q9UBB5 411 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 HSPB11Q9Y547 144 aa7.76□□□□□ -1.17
NEK3-204ENST00000552973 TRAV8-1A0A0A6YYK1 113 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 TRAV4A0A0B4J268 109 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 HMGB3O15347 200 aaKnown RBP7.75□□□□□ -1.17
NEK3-204ENST00000552973 UPK1BO75841 260 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 MPC2O95563 127 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 ORM1P02763 201 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 SMR3BP02814 79 aaPredicted RBP7.75□□□□□ -1.17
NEK3-204ENST00000552973 CRYGDP07320 174 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 TAS2R45P59539 299 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 GNG5P63218 68 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 HAMPP81172 84 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms