RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 DOCK9Q9BZ29 2069 aa6.51□□□□□ -1.37
CTNND1-234ENST00000532844 HLA-DRB4P13762 266 aa6.51□□□□□ -1.37
CTNND1-234ENST00000532844 ZFP2Q6ZN57 461 aa6.51□□□□□ -1.37
CTNND1-234ENST00000532844 ZNF833PQ6ZTB9 187 aa6.51□□□□□ -1.37
CTNND1-234ENST00000532844 HLA-DRB4X5D2U9 266 aa6.51□□□□□ -1.37
CTNND1-234ENST00000532844 ABCA1O95477 2261 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 PROP1O75360 226 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 IGKV1-39P01597 117 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 IGKV1D-39P04432 117 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 CYYR1Q96J86 154 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 BPESC1Q9GZL8 116 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 NDUFA4L2Q9NRX3 87 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 SIVA1O15304 175 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 C17orf58Q2M2W7 97 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 LGALS9BQ3B8N2 356 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 LGALS9CQ6DKI2 356 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 IL17RELQ6ZVW7 336 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 Q8N8P6 123 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 A0A1B0GUS0 222 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 IGHV2-5P01817 119 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 ARMS2P0C7Q2 107 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 PRR30Q53SZ7 412 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-234ENST00000532844 RUSC1-AS1Q66K80 236 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 Q8TCH9 128 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 RHPN1-AS1Q9BWJ2 59 aa6.5□□□□□ -1.37
CTNND1-234ENST00000532844 C12orf74Q32Q52 190 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 C18orf32Q8TCD1 76 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 TANC1Q9C0D5 1861 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 A0A0U1RQV1 116 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-234ENST00000532844 K7ERJ3 54 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 CFC1BP0CG36 223 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 CFC1P0CG37 223 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 GATA3P23771 443 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 SPANXB1Q9NS25 103 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-234ENST00000532844 ZNF492Q9P255 531 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 FRMPD3Q5JV73 1810 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 HELZP42694 1942 aaKnown RBP6.49□□□□□ -1.37
CTNND1-234ENST00000532844 TRBV25-1A0A075B6N4 114 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 CCL25O15444 150 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 IGLL1P15814 213 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 TMEM213A2RRL7 107 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 PDE6HQ13956 83 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 FANCMQ8IYD8 2048 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 I3L3M4 83 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 CFHR3Q02985 330 aa6.49□□□□□ -1.37
CTNND1-234ENST00000532844 IGKV3D-7A0A0C4DH55 119 aa6.48□□□□□ -1.37
CTNND1-234ENST00000532844 ATP6V0E1O15342 81 aa6.48□□□□□ -1.37
CTNND1-234ENST00000532844 PFN1P07737 140 aaKnown RBP6.48□□□□□ -1.37
CTNND1-234ENST00000532844 RSPO1Q2MKA7 263 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-234ENST00000532844 OVOL3O00110 214 aa6.48□□□□□ -1.37
CTNND1-234ENST00000532844 CFHR2P36980 270 aa6.48□□□□□ -1.37
CTNND1-234ENST00000532844 HERV-K104P63124 156 aa6.48□□□□□ -1.37
CTNND1-234ENST00000532844 VWC2Q2TAL6 325 aa6.48□□□□□ -1.37
CTNND1-234ENST00000532844 DAZ1Q9NQZ3 744 aaKnown RBP6.48□□□□□ -1.37
CTNND1-234ENST00000532844 PRSS29PA6NIE9 313 aa6.48□□□□□ -1.37
CTNND1-234ENST00000532844 LINC01619G3V211 115 aa6.48□□□□□ -1.37
CTNND1-234ENST00000532844 NDUFB8O95169 186 aa6.48□□□□□ -1.37
CTNND1-234ENST00000532844 TRAV26-1A0A087WT03 109 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 J3QQQ9 107 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 SDK2Q58EX2 2172 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 PLXND1Q9Y4D7 1925 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 C15orf65H3BRN8 121 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 NREPQ16612 68 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 CR1LQ2VPA4 569 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 WIPF3A6NGB9 483 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 ESPL1Q14674 2120 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 TRIOBPQ9H2D6 2365 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 TRBV19A0A075B6N1 114 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 PRSS46E5RG02 174 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 MAPK1IP1LQ8NDC0 245 aa6.47□□□□□ -1.37
CTNND1-234ENST00000532844 F8VRH5 84 aa6.46□□□□□ -1.37
CTNND1-234ENST00000532844 UBE2E1P51965 193 aa6.46□□□□□ -1.37
CTNND1-234ENST00000532844 YPEL3P61236 119 aaPredicted RBP6.46□□□□□ -1.37
CTNND1-234ENST00000532844 ANAPC1Q9H1A4 1944 aa6.46□□□□□ -1.37
CTNND1-234ENST00000532844 PHF3Q92576 2039 aaKnown RBP6.46□□□□□ -1.37
CTNND1-234ENST00000532844 IGLV3-1P01715 115 aa6.46□□□□□ -1.37
CTNND1-234ENST00000532844 C8orf86Q6ZUL3 223 aa6.46□□□□□ -1.37
CTNND1-234ENST00000532844 DEFB105AQ8NG35 78 aa6.46□□□□□ -1.37
CTNND1-234ENST00000532844 TPSG1Q9NRR2 321 aa6.46□□□□□ -1.37
CTNND1-234ENST00000532844 V9GYV3 84 aa6.46□□□□□ -1.37
CTNND1-234ENST00000532844 Q8NFD4 153 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 MRPL35Q9NZE8 188 aaKnown RBP6.46□□□□□ -1.38
CTNND1-234ENST00000532844 AHCTF1Q8WYP5 2266 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 DKK1O94907 266 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 ZNF134P52741 427 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 TEX36Q5VZQ5 186 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 Q6ZWC4 215 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 SH2D6Q7Z4S9 175 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 LRRK1Q38SD2 2015 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 IGHV4-28A0A0C4DH34 117 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 SMIM27A0A1W2PRY6 76 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 LOXP28300 417 aaPredicted RBP6.46□□□□□ -1.38
CTNND1-234ENST00000532844 HERVK_113P63121 156 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 VSIG2Q96IQ7 327 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 KIAA1671Q9BY89 1806 aa6.46□□□□□ -1.38
CTNND1-234ENST00000532844 SPTBN1Q01082 2364 aaKnown RBP6.46□□□□□ -1.38
CTNND1-234ENST00000532844 AKAP6Q13023 2319 aa6.45□□□□□ -1.38
CTNND1-234ENST00000532844 MSMBP08118 114 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms