RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 FOXI2Q6ZQN5 318 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 DLX4Q92988 240 aaPredicted RBP12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 ALKBH7Q9BT30 221 aaPredicted RBP12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 TRAV9-1A0A075B6T8 112 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 ATP5LO75964 103 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 CYSLTR1Q9Y271 337 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 ASPHD1Q5U4P2 390 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 A0A096LPF7 62 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 CRYGCP07315 174 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 ADMP35318 185 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 NUP35Q8NFH5 326 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 LINC00574Q9H8X3 128 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 C10orf99Q6UWK7 81 aa12.19□□□□□ -0.46
PPFIA1-222ENST00000532504 TRAV8-6A0A0B4J262 113 aa12.19□□□□□ -0.46
PPFIA1-222ENST00000532504 AVPP01185 164 aa12.19□□□□□ -0.46
PPFIA1-222ENST00000532504 CIRBPQ14011 172 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-222ENST00000532504 PRRC2CQ9Y520 2896 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-222ENST00000532504 SMKR1H3BMG3 65 aa12.19□□□□□ -0.46
PPFIA1-222ENST00000532504 MTORP42345 2549 aa12.19□□□□□ -0.46
PPFIA1-222ENST00000532504 UNQ9165/PRO28630Q6UXU0 137 aa12.19□□□□□ -0.46
PPFIA1-222ENST00000532504 MRPL36Q9P0J6 103 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-222ENST00000532504 C5orf52A6NGY3 159 aa12.18□□□□□ -0.46
PPFIA1-222ENST00000532504 IL15RAQ13261 267 aa12.18□□□□□ -0.46
PPFIA1-222ENST00000532504 CFHR4Q92496 578 aa12.18□□□□□ -0.46
PPFIA1-222ENST00000532504 MRAP2Q96G30 205 aa12.18□□□□□ -0.46
PPFIA1-222ENST00000532504 WIPF2Q8TF74 440 aaPredicted RBP12.18□□□□□ -0.46
PPFIA1-222ENST00000532504 FANCD2OSQ96PS1 177 aa12.18□□□□□ -0.46
PPFIA1-222ENST00000532504 H3BRM9 83 aa12.18□□□□□ -0.46
PPFIA1-222ENST00000532504 AMN1Q8IY45 258 aa12.17□□□□□ -0.46
PPFIA1-222ENST00000532504 C1orf159Q96HA4 380 aa12.17□□□□□ -0.46
PPFIA1-222ENST00000532504 NOP10Q9NPE3 64 aaKnown RBP12.17□□□□□ -0.46
PPFIA1-222ENST00000532504 NXT2Q9NPJ8 142 aaKnown RBP12.17□□□□□ -0.46
PPFIA1-222ENST00000532504 LOC102724200A0A096LPH7 203 aaPredicted RBP12.17□□□□□ -0.46
PPFIA1-222ENST00000532504 PMCHL2Q9BQD1 86 aa12.17□□□□□ -0.46
PPFIA1-222ENST00000532504 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
PPFIA1-222ENST00000532504 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
PPFIA1-222ENST00000532504 LSM4Q9Y4Z0 139 aaKnown RBP12.17□□□□□ -0.46
PPFIA1-222ENST00000532504 FN1P02751 2386 aaKnown RBP12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 PMCHL1Q16048 86 aa12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 ARL6IP6Q8N6S5 226 aa12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 GSN-AS1Q9NRJ2 163 aa12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 OR13C6PQ8NH95 151 aa12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 C11orf68Q9H3H3 251 aaKnown RBP12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 CDX1P47902 265 aaPredicted RBP12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 TMEM61Q8N0U2 210 aa12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 OR11H2Q8NH07 326 aa12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 CSTL1Q9H114 145 aa12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 TMEM213A2RRL7 107 aa12.16□□□□□ -0.46
PPFIA1-222ENST00000532504 TMEM89A2RUT3 159 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 BUB3O43684 328 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 IGHG4P01861 327 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 DEFB1P60022 68 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 ORMDL2Q53FV1 153 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 ATP5L2Q7Z4Y8 100 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 GPHB5Q86YW7 130 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 A0A0J9YY99 117 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 SERF1AO75920 110 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 A0A1B0GW64 132 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 MORN5Q5VZ52 161 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.46
PPFIA1-222ENST00000532504 RAB37Q96AX2 223 aa12.15□□□□□ -0.47
PPFIA1-222ENST00000532504 SPATA45Q537H7 98 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 SORL1Q92673 2214 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 SPRY2O43597 315 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 LINC00614P0C842 121 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 NDUFA11Q86Y39 141 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 DOPEY1Q5JWR5 2465 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 RPL13AP40429 203 aaKnown RBP12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 C16orf54Q6UWD8 224 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 OR5A1Q8NGJ0 315 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 IGF2BP2-AS1Q96M15 143 aa12.14□□□□□ -0.47
PPFIA1-222ENST00000532504 DEFB135Q30KP9 77 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 HIST1H4GQ99525 98 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 GNB1LQ9BYB4 327 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 PLXNB1O43157 2135 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 DEFB4AO15263 64 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 PATE2Q6UY27 113 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 IGHV3-64A0A075B6Q5 118 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 M0R143 59 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 BRWD1-AS2P59051 145 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 LY6LH3BQJ8 138 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 HBDP02042 147 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 HOXA5P20719 270 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
PPFIA1-222ENST00000532504 GNRH2O43555 120 aa12.12□□□□□ -0.47
PPFIA1-222ENST00000532504 ACANP16112 2415 aa12.12□□□□□ -0.47
PPFIA1-222ENST00000532504 VCYO14598 125 aa12.12□□□□□ -0.47
PPFIA1-222ENST00000532504 SHISA2Q6UWI4 295 aa12.12□□□□□ -0.47
PPFIA1-222ENST00000532504 RHODO00212 210 aa12.12□□□□□ -0.47
PPFIA1-222ENST00000532504 HILS1P60008 231 aa12.12□□□□□ -0.47
PPFIA1-222ENST00000532504 LINC00469Q8N7U9 141 aa12.12□□□□□ -0.47
PPFIA1-222ENST00000532504 ZNRF2Q8NHG8 242 aa12.12□□□□□ -0.47
PPFIA1-222ENST00000532504 LINC01006Q8NI28 216 aa12.12□□□□□ -0.47
PPFIA1-222ENST00000532504 PRUNE2Q8WUY3 3088 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 A0A0U1RRA0 63 aa12.11□□□□□ -0.47
PPFIA1-222ENST00000532504 NIT1Q86X76 327 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms