RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 RAB1BQ9H0U4 201 aa9.77□□□□□ -0.84
CAPN1-208ENST00000527323 CSTL1Q9H114 145 aa9.77□□□□□ -0.84
CAPN1-208ENST00000527323 U3KQK5 164 aa9.77□□□□□ -0.84
CAPN1-208ENST00000527323 IGHV3OR16-8A0A075B7F1 116 aa9.77□□□□□ -0.85
CAPN1-208ENST00000527323 WI2-2373I1.2A0A1W2PRP0 233 aa9.77□□□□□ -0.85
CAPN1-208ENST00000527323 PRSS1P07477 247 aa9.77□□□□□ -0.85
CAPN1-208ENST00000527323 PRRC2AP48634 2157 aaKnown RBP9.77□□□□□ -0.85
CAPN1-208ENST00000527323 MTORP42345 2549 aa9.77□□□□□ -0.85
CAPN1-208ENST00000527323 PDE6HQ13956 83 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 TMEM190Q8WZ59 177 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 PRR25Q96S07 402 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 SRSF8Q9BRL6 282 aaKnown RBP9.76□□□□□ -0.85
CAPN1-208ENST00000527323 MSRB1Q9NZV6 116 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 IGHV3-35A0A0C4DH35 117 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 GCSHP23434 173 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 BMI1P35226 326 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 SPCS1Q9Y6A9 102 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 K7EP34 96 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 VGLL1Q99990 258 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 MAP1LC3AQ9H492 121 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 CREBBPQ92793 2442 aa9.76□□□□□ -0.85
CAPN1-208ENST00000527323 NCBP2LA6PVI3 153 aaKnown RBP9.75□□□□□ -0.85
CAPN1-208ENST00000527323 RPL7P18124 248 aaKnown RBP9.75□□□□□ -0.85
CAPN1-208ENST00000527323 LEPP41159 167 aa9.75□□□□□ -0.85
CAPN1-208ENST00000527323 UFSP1Q6NVU6 142 aa9.75□□□□□ -0.85
CAPN1-208ENST00000527323 KMT2BQ9UMN6 2715 aaPredicted RBP9.75□□□□□ -0.85
CAPN1-208ENST00000527323 EVI2AP22794 236 aa9.75□□□□□ -0.85
CAPN1-208ENST00000527323 HLA-DMBP28068 263 aa9.75□□□□□ -0.85
CAPN1-208ENST00000527323 PPIFP30405 207 aaKnown RBP9.75□□□□□ -0.85
CAPN1-208ENST00000527323 ZNF80P51504 273 aaPredicted RBP9.75□□□□□ -0.85
CAPN1-208ENST00000527323 ADAMTSL5Q6ZMM2 481 aa9.75□□□□□ -0.85
CAPN1-208ENST00000527323 DPM3Q9P2X0 92 aa9.75□□□□□ -0.85
CAPN1-208ENST00000527323 SIVA1O15304 175 aa9.74□□□□□ -0.85
CAPN1-208ENST00000527323 C21orf62Q9NYP8 219 aa9.74□□□□□ -0.85
CAPN1-208ENST00000527323 TTTY13Q9BZ97 58 aa9.74□□□□□ -0.85
CAPN1-208ENST00000527323 SMIM13P0DJ93 91 aa9.74□□□□□ -0.85
CAPN1-208ENST00000527323 FABP2P12104 132 aa9.74□□□□□ -0.85
CAPN1-208ENST00000527323 LY6LH3BQJ8 138 aa9.73□□□□□ -0.85
CAPN1-208ENST00000527323 KLRD1Q13241 179 aa9.73□□□□□ -0.85
CAPN1-208ENST00000527323 FANCD2OSQ96PS1 177 aa9.73□□□□□ -0.85
CAPN1-208ENST00000527323 A0A1W2PPM0 123 aa9.73□□□□□ -0.85
CAPN1-208ENST00000527323 FBLL1A6NHQ2 334 aaKnown RBP9.73□□□□□ -0.85
CAPN1-208ENST00000527323 GAS8-AS1O95177 125 aa9.73□□□□□ -0.85
CAPN1-208ENST00000527323 RPL24P83731 157 aaKnown RBP9.73□□□□□ -0.85
CAPN1-208ENST00000527323 SRSF1Q07955 248 aaKnown RBP eCLIP9.72□□□□□ -0.85
CAPN1-208ENST00000527323 C5orf64Q2M2E5 130 aa9.72□□□□□ -0.85
CAPN1-208ENST00000527323 ZNF672Q499Z4 452 aaPredicted RBP9.72□□□□□ -0.85
CAPN1-208ENST00000527323 SAMD5Q5TGI4 173 aa9.72□□□□□ -0.85
CAPN1-208ENST00000527323 ABCA2Q9BZC7 2435 aa9.72□□□□□ -0.85
CAPN1-208ENST00000527323 CEACAM3P40198 252 aa9.72□□□□□ -0.85
CAPN1-208ENST00000527323 ERCC8Q13216 396 aa9.72□□□□□ -0.85
CAPN1-208ENST00000527323 FABP5P3A8MUU1 101 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 GATA1P15976 413 aaPredicted RBP9.71□□□□□ -0.85
CAPN1-208ENST00000527323 PAX8Q06710 450 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 GTSCR1Q86UQ5 136 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 ARPC1AQ92747 370 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 FOXC2Q99958 501 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 NF1P21359 2839 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 ITPR3Q14573 2671 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 IGLV11-55A0A075B6I3 123 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 TMEM8BA6NDV4 472 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 G3V4G9 280 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 MAPK1IP1LQ8NDC0 245 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 OR5A1Q8NGJ0 315 aa9.71□□□□□ -0.85
CAPN1-208ENST00000527323 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.86
CAPN1-208ENST00000527323 SCGB2A1O75556 95 aa9.71□□□□□ -0.86
CAPN1-208ENST00000527323 FCER1GP30273 86 aa9.71□□□□□ -0.86
CAPN1-208ENST00000527323 FLNAP21333 2647 aaKnown RBP9.7□□□□□ -0.86
CAPN1-208ENST00000527323 MXRA5Q9NR99 2828 aa9.7□□□□□ -0.86
CAPN1-208ENST00000527323 IGLC6P0CF74 106 aa9.7□□□□□ -0.86
CAPN1-208ENST00000527323 RNF185Q96GF1 192 aa9.7□□□□□ -0.86
CAPN1-208ENST00000527323 TMEM160Q9NX00 188 aa9.7□□□□□ -0.86
CAPN1-208ENST00000527323 IGKCP01834 107 aa9.7□□□□□ -0.86
CAPN1-208ENST00000527323 FXYD2P54710 66 aa9.7□□□□□ -0.86
CAPN1-208ENST00000527323 TMEM158Q8WZ71 300 aa9.7□□□□□ -0.86
CAPN1-208ENST00000527323 NXT2Q9NPJ8 142 aaKnown RBP9.7□□□□□ -0.86
CAPN1-208ENST00000527323 MYO9AB2RTY4 2548 aa9.7□□□□□ -0.86
CAPN1-208ENST00000527323 ZNF562Q6V9R5 426 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 NPBQ8NG41 125 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 SMAD5-AS1Q9Y6J3 95 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 F8W735 103 aaPredicted RBP9.69□□□□□ -0.86
CAPN1-208ENST00000527323 K7ERJ3 54 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 CFHR4Q92496 578 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 CHAC1Q9BUX1 264 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 NPFFR1Q9GZQ6 430 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 IGHV3OR16-13A0A075B7E8 117 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 IGHV3-74A0A0B4J1X5 117 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 IGHV3-66A0A0C4DH42 116 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 NDUFA3O95167 84 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 NDPQ00604 133 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 ZC2HC1BQ5TFG8 222 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 DYNAPQ8N1N2 210 aa9.69□□□□□ -0.86
CAPN1-208ENST00000527323 NHP2Q9NX24 153 aaKnown RBP9.69□□□□□ -0.86
CAPN1-208ENST00000527323 PRAC2D3DTV9 90 aa9.68□□□□□ -0.86
CAPN1-208ENST00000527323 CTSGP08311 255 aa9.68□□□□□ -0.86
CAPN1-208ENST00000527323 UNC79Q9P2D8 2635 aa9.68□□□□□ -0.86
CAPN1-208ENST00000527323 K7EMI3 77 aa9.68□□□□□ -0.86
CAPN1-208ENST00000527323 KRTAP10-9P60411 292 aa9.68□□□□□ -0.86
CAPN1-208ENST00000527323 RNF182Q8N6D2 247 aa9.68□□□□□ -0.86
CAPN1-208ENST00000527323 DPM2O94777 84 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms