RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
MRPS28-209ENST00000522987 PRO0255Q9UI72 69 aa10.51□□□□□ -0.73
MRPS28-209ENST00000522987 FAM240BA0A1B0GVZ2 78 aa10.5□□□□□ -0.73
MRPS28-209ENST00000522987 ZNF138P52744 262 aa10.5□□□□□ -0.73
MRPS28-209ENST00000522987 WFDC10BQ8IUB3 73 aa10.5□□□□□ -0.73
MRPS28-209ENST00000522987 CHAC2Q8WUX2 184 aa10.5□□□□□ -0.73
MRPS28-209ENST00000522987 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
MRPS28-209ENST00000522987 ZNF479Q96JC4 524 aa10.5□□□□□ -0.73
MRPS28-209ENST00000522987 OR5AC2Q9NZP5 309 aa10.5□□□□□ -0.73
MRPS28-209ENST00000522987 EREGO14944 169 aa10.49□□□□□ -0.73
MRPS28-209ENST00000522987 OR7C2O60412 319 aa10.49□□□□□ -0.73
MRPS28-209ENST00000522987 RANP62826 216 aaKnown RBP10.49□□□□□ -0.73
MRPS28-209ENST00000522987 HAMPP81172 84 aa10.49□□□□□ -0.73
MRPS28-209ENST00000522987 MRPL23Q16540 153 aaKnown RBP10.49□□□□□ -0.73
MRPS28-209ENST00000522987 TMEM183BQ1AE95 376 aa10.49□□□□□ -0.73
MRPS28-209ENST00000522987 TMEM183AQ8IXX5 376 aa10.49□□□□□ -0.73
MRPS28-209ENST00000522987 NAGKQ9UJ70 344 aa10.49□□□□□ -0.73
MRPS28-209ENST00000522987 RPH3ALQ9UNE2 315 aa10.49□□□□□ -0.73
MRPS28-209ENST00000522987 XGP55808 180 aa10.48□□□□□ -0.73
MRPS28-209ENST00000522987 KRTAP10-1P60331 282 aa10.48□□□□□ -0.73
MRPS28-209ENST00000522987 NEGR1Q7Z3B1 354 aa10.48□□□□□ -0.73
MRPS28-209ENST00000522987 A0A087WTM6 91 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 LOC100131303A0A0U1RQF7 123 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 H0YIZ8 118 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 NMBP08949 121 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 GYPEP15421 78 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 SRIP30626 198 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 HYLS1Q96M11 299 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 SLC25A31Q9H0C2 315 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 PGPEP1Q9NXJ5 209 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 PTTG2Q9NZH5 202 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 LY96Q9Y6Y9 160 aa10.47□□□□□ -0.73
MRPS28-209ENST00000522987 K7EQD1 137 aa10.46□□□□□ -0.73
MRPS28-209ENST00000522987 SMR3BP02814 79 aaPredicted RBP10.46□□□□□ -0.73
MRPS28-209ENST00000522987 INAFM2P0DMQ5 153 aa10.46□□□□□ -0.73
MRPS28-209ENST00000522987 CSN1S1P47710 185 aa10.46□□□□□ -0.73
MRPS28-209ENST00000522987 UBE2L3P68036 154 aaKnown RBP10.46□□□□□ -0.73
MRPS28-209ENST00000522987 LYPD1Q8N2G4 141 aa10.46□□□□□ -0.73
MRPS28-209ENST00000522987 MRPL32Q9BYC8 188 aaKnown RBP10.46□□□□□ -0.73
MRPS28-209ENST00000522987 WDR61Q9GZS3 305 aaKnown RBP10.46□□□□□ -0.73
MRPS28-209ENST00000522987 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
MRPS28-209ENST00000522987 SLAQ13239 276 aa10.45□□□□□ -0.74
MRPS28-209ENST00000522987 FFAR4Q5NUL3 377 aa10.45□□□□□ -0.74
MRPS28-209ENST00000522987 Q5VSD8 79 aa10.45□□□□□ -0.74
MRPS28-209ENST00000522987 PCNPQ8WW12 178 aaKnown RBP10.45□□□□□ -0.74
MRPS28-209ENST00000522987 SMIM3Q9BZL3 60 aa10.45□□□□□ -0.74
MRPS28-209ENST00000522987 MSRB1Q9NZV6 116 aa10.45□□□□□ -0.74
MRPS28-209ENST00000522987 GNRH2O43555 120 aa10.44□□□□□ -0.74
MRPS28-209ENST00000522987 IFNA5P01569 189 aa10.44□□□□□ -0.74
MRPS28-209ENST00000522987 ZNF266Q14584 549 aa10.44□□□□□ -0.74
MRPS28-209ENST00000522987 MZT2BQ6NZ67 158 aa10.44□□□□□ -0.74
MRPS28-209ENST00000522987 FAM159AQ6UWV7 190 aa10.44□□□□□ -0.74
MRPS28-209ENST00000522987 NFE4Q86UQ8 179 aa10.44□□□□□ -0.74
MRPS28-209ENST00000522987 CCDC32Q9BV29 185 aa10.44□□□□□ -0.74
MRPS28-209ENST00000522987 F6UZH7 168 aa10.43□□□□□ -0.74
MRPS28-209ENST00000522987 OR10G4Q8NGN3 311 aa10.43□□□□□ -0.74
MRPS28-209ENST00000522987 TRAV9-2A0A087WT02 112 aa10.42□□□□□ -0.74
MRPS28-209ENST00000522987 DIRC3C9JPN6 131 aa10.42□□□□□ -0.74
MRPS28-209ENST00000522987 C17orf112F2Z3M2 114 aa10.42□□□□□ -0.74
MRPS28-209ENST00000522987 EVI2AP22794 236 aa10.42□□□□□ -0.74
MRPS28-209ENST00000522987 CDPF1Q6NVV7 123 aa10.42□□□□□ -0.74
MRPS28-209ENST00000522987 NHLRC2Q8NBF2 726 aa10.42□□□□□ -0.74
MRPS28-209ENST00000522987 ENKURQ8TC29 256 aa10.42□□□□□ -0.74
MRPS28-209ENST00000522987 KCNIP2Q9NS61 270 aa10.42□□□□□ -0.74
MRPS28-209ENST00000522987 TRGV11A0A075B6L2 103 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 RBAKDNA6NC62 111 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 CRYGDP07320 174 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 ASAH1Q13510 395 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 Q6AWC8 147 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 OR4C5Q8NGB2 326 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 FRZBQ92765 325 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 SGK494Q96LW2 274 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 ATP5SQ99766 215 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 SPXQ9BT56 116 aa10.41□□□□□ -0.74
MRPS28-209ENST00000522987 FLG2Q5D862 2391 aaPredicted RBP10.41□□□□□ -0.74
MRPS28-209ENST00000522987 HERC1Q15751 4861 aa10.4□□□□□ -0.74
MRPS28-209ENST00000522987 TRAV8-1A0A0A6YYK1 113 aa10.4□□□□□ -0.74
MRPS28-209ENST00000522987 PGPA6NDG6 321 aa10.4□□□□□ -0.74
MRPS28-209ENST00000522987 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
MRPS28-209ENST00000522987 GNG5P63218 68 aa10.4□□□□□ -0.74
MRPS28-209ENST00000522987 GOLT1AQ6ZVE7 132 aa10.4□□□□□ -0.74
MRPS28-209ENST00000522987 RASL10AQ92737 203 aa10.4□□□□□ -0.74
MRPS28-209ENST00000522987 NMES1Q9C002 83 aa10.4□□□□□ -0.74
MRPS28-209ENST00000522987 Q9HAA7 133 aa10.4□□□□□ -0.74
MRPS28-209ENST00000522987 TRAV4A0A0B4J268 109 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 TRBV7-9A0A0J9YWB2 115 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 C9JCJ5 164 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 ORM1P02763 201 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 GCSHP23434 173 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 H2BFSP57053 126 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 KHDC3LQ587J8 217 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 IQCF2Q8IXL9 164 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 CMTM2Q8TAZ6 248 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 PPP1R1CQ8WVI7 109 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 TXNDC17Q9BRA2 123 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 HSPB11Q9Y547 144 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 FAT1Q14517 4588 aa10.39□□□□□ -0.75
MRPS28-209ENST00000522987 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
MRPS28-209ENST00000522987 IGHV3-73A0A0B4J1V6 119 aa10.38□□□□□ -0.75
MRPS28-209ENST00000522987 PSCAO43653 123 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms