RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 CKS1BP61024 79 aa0.97□□□□□ -2.25
RNU6-840P-201ENST00000517275 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
RNU6-840P-201ENST00000517275 SPATA45Q537H7 98 aa0.97□□□□□ -2.25
RNU6-840P-201ENST00000517275 HSD17B12Q53GQ0 312 aa0.97□□□□□ -2.25
RNU6-840P-201ENST00000517275 TCTEX1D1Q8N7M0 179 aa0.97□□□□□ -2.25
RNU6-840P-201ENST00000517275 C5orf17Q8NAS9 161 aa0.97□□□□□ -2.25
RNU6-840P-201ENST00000517275 DNAJC15Q9Y5T4 150 aa0.97□□□□□ -2.25
RNU6-840P-201ENST00000517275 HLA-DRB4X5D2U9 266 aa0.97□□□□□ -2.25
RNU6-840P-201ENST00000517275 COL1A1P02452 1464 aaPredicted RBP0.97□□□□□ -2.25
RNU6-840P-201ENST00000517275 MUC4Q99102 2169 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 PTPRFP10586 1907 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 DNAL4O96015 105 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 TSPAN19P0C672 248 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 MPC1LP0DKB6 136 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 HIST1H1BP16401 226 aaKnown RBP0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 S100A12P80511 92 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 SBSPONQ8IVN8 264 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 OR10AC1Q8NH08 325 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 C22orf24Q9Y442 160 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 ERBINQ96RT1 1412 aa0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 CHD3Q12873 2000 aaKnown RBP0.96□□□□□ -2.26
RNU6-840P-201ENST00000517275 SMIM24O75264 130 aa0.95□□□□□ -2.26
RNU6-840P-201ENST00000517275 PPYP01298 95 aa0.95□□□□□ -2.26
RNU6-840P-201ENST00000517275 CD14P08571 375 aa0.95□□□□□ -2.26
RNU6-840P-201ENST00000517275 DEFB132Q7Z7B7 95 aa0.95□□□□□ -2.26
RNU6-840P-201ENST00000517275 OTOSQ8NHW6 89 aa0.95□□□□□ -2.26
RNU6-840P-201ENST00000517275 AP1S3Q96PC3 154 aa0.95□□□□□ -2.26
RNU6-840P-201ENST00000517275 GSKIPQ9P0R6 139 aa0.95□□□□□ -2.26
RNU6-840P-201ENST00000517275 ARHGAP31Q2M1Z3 1444 aa0.95□□□□□ -2.26
RNU6-840P-201ENST00000517275 SIP14410 1827 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 ZFC3H1O60293 1989 aaKnown RBP0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 WDR97A6NE52 1622 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 A0A1W2PPB8 328 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 A0A1W2PRS3 328 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 KIR3DP1A8MWS1 328 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 CD3DP04234 171 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 GYPBP06028 91 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 CKS2P33552 79 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 SMCO1Q147U7 214 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 C10orf111Q8N326 155 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 WFDC10AQ9H1F0 79 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 SLC35B3Q9H1N7 401 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 CALML5Q9NZT1 146 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 FGD6Q6ZV73 1430 aa0.94□□□□□ -2.26
RNU6-840P-201ENST00000517275 OVOS2A0A0J9YW53 1432 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 OVOS2Q6IE36 1432 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 IGHV1-24A0A0C4DH33 117 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 ARPC4P59998 168 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 HIST1H1AQ02539 215 aaPredicted RBP0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 RHOHQ15669 191 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 NEDD8Q15843 81 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 C3orf62Q6ZUJ4 267 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 MMGT1Q8N4V1 131 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 TET1Q8NFU7 2136 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 SMIM7Q9BQ49 75 aa0.93□□□□□ -2.26
RNU6-840P-201ENST00000517275 UHRF1BP1LA0JNW5 1464 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 CEP152O94986 1710 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 DISP2A7MBM2 1401 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 PTPRGP23470 1445 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 MED12Q93074 2177 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 TRAV2A0A0B4J234 112 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 BBIP1A8MTZ0 92 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 YPEL1O60688 119 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 SULT1C4O75897 302 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 NCR2O95944 276 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 IGF2P01344 180 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 EFNA4P52798 201 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 FXYD4P59646 89 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 PLGLB1Q02325 96 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 SMIM21Q3B7S5 101 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 OCIAD2Q56VL3 154 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 GLYATL3Q5SZD4 288 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 LINC00575Q6W349 94 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 LZICQ8WZA0 190 aa0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 PAIP2BQ9ULR5 123 aaKnown RBP0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 BOKQ9UMX3 212 aaPredicted RBP0.92□□□□□ -2.26
RNU6-840P-201ENST00000517275 USP54Q70EL1 1684 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 CASP8AP2Q9UKL3 1982 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 LOC107984156A0A0G2JMH3 177 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 NCR3O14931 201 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 EDF1O60869 148 aaKnown RBP0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 HMGN1P05114 100 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 IGLC6P0CF74 106 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 PCBD1P61457 104 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 SNRPD3P62318 126 aaKnown RBP0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 ATP11AUNQ6ZP68 121 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 ARL17AQ8IVW1 177 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 LPAR5Q9H1C0 372 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 BANF2Q9H503 90 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 COMMD3Q9UBI1 195 aa0.91□□□□□ -2.26
RNU6-840P-201ENST00000517275 NUPR2A6NF83 97 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 M0R2P5 195 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 CDC42EP2O14613 210 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 SNRNP200O75643 2136 aaKnown RBP0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 KDELR1P24390 212 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 CSAG1Q6PB30 78 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 IDO2Q6ZQW0 420 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 Q8N6K4 173 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 OR8J3Q8NGG0 315 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 MRPL35Q9NZE8 188 aaKnown RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms