RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 APRG1Q8IVJ8 170 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 WFDC11Q8NEX6 87 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 TPSG1Q9NRR2 321 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 NYNRINQ9P2P1 1898 aaKnown RBP3.33□□□□□ -1.88
VCAN-209ENST00000513016 ACACAQ13085 2346 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 A0A0G2JRQ6 117 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 A0A1W2PNU3 283 aaPredicted RBP3.32□□□□□ -1.88
VCAN-209ENST00000513016 C11orf53Q8IXP5 236 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 AMN1Q8IY45 258 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 SPCS1Q9Y6A9 102 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 PFN2P35080 140 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 FHL1Q13642 323 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 C2orf66Q6UXQ4 117 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 NFE4Q86UQ8 179 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 BCL6BQ8N143 479 aaPredicted RBP3.32□□□□□ -1.88
VCAN-209ENST00000513016 CITED1Q99966 193 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 CKAP5Q14008 2032 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 TRBV24-1A0A075B6N3 115 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 K7EQD1 137 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 FAM104BQ5XKR9 115 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 CFHR4Q92496 578 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 CACNA1IQ9P0X4 2223 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 IGLV11-55A0A075B6I3 123 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 TRAV8-2A0A0B4J237 113 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 TRAV8-4A0A0B4J246 113 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 LMO4P61968 165 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 HERV-K104P63124 156 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 Q6ZRM9 215 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 SPANXA1Q9NS26 97 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 PIKFYVEQ9Y2I7 2098 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 BTCP35070 178 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 STPG4Q8N801 248 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 MBD6Q96DN6 1003 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 C14orf144Q96I85 54 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 TRAV13-2A0A0B4J235 113 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 IGLC7A0M8Q6 106 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 H3BQ85 93 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 COX7A2LO14548 114 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 DIAPH2-AS1Q14236 149 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 SCRT2Q9NQ03 307 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 CEP290O15078 2479 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 ABCA4P78363 2273 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 C19orf84I3L1E1 186 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 LYL1P12980 280 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 RPL18AQ02543 176 aaKnown RBP3.32□□□□□ -1.88
VCAN-209ENST00000513016 ZNF479Q96JC4 524 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 PRO0255Q9UI72 69 aa3.32□□□□□ -1.88
VCAN-209ENST00000513016 MYO7BQ6PIF6 2116 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 IGHV3-30P01768 117 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 IGHV3-33P01772 117 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 IGHV3-30-3P0DP02 117 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 IGHV3-30-5P0DP03 117 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 UBE2AP49459 152 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 RSPO1Q2MKA7 263 aaPredicted RBP3.31□□□□□ -1.88
VCAN-209ENST00000513016 DEFB135Q30KP9 77 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 Q6ZQT7 251 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 HHLA3Q9XRX5 114 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 LYRM9A8MSI8 78 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 SNAI2O43623 268 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 CRYGCP07315 174 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 FAM231DQ6ZW35 169 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 LINC01548A6NM66 108 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 NPC2P61916 151 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 NXPH4O95158 308 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 NDUFA1O15239 70 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 IGHG4P01861 327 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 KRTAP27-1Q3LI81 207 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 ZNF581Q9P0T4 197 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 VWA8A3KMH1 1905 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 RP1P56715 2156 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 TRAV10A0A0B4J240 114 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 CTAG1AP78358 180 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 CD300CQ08708 224 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 AMTNQ6UX39 209 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 Q8N7P7 452 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 RLFQ13129 1914 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 SOCS3O14543 225 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 ESDP10768 282 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 DDTP30046 118 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 KIR2DL5BQ8NHK3 375 aa3.31□□□□□ -1.88
VCAN-209ENST00000513016 CNOT1A5YKK6 2376 aaKnown RBP3.3□□□□□ -1.88
VCAN-209ENST00000513016 CXCL5P42830 114 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 IL15RAQ13261 267 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 AGPAT4-IT1Q9H0P7 198 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 RTTNQ86VV8 2226 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 LGALS9O00182 355 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 XCL1P47992 114 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 ARTNQ5T4W7 220 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 ADAMTSL5Q6ZMM2 481 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 NUP210Q8TEM1 1887 aaPredicted RBP3.3□□□□□ -1.88
VCAN-209ENST00000513016 SMKR1H3BMG3 65 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 IGLV1-47P01700 117 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 MED14OSP0DP75 135 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 MIFP14174 115 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 SLC25A29Q8N8R3 303 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 CYTL1Q9NRR1 136 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 DMRT1Q9Y5R6 373 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 FAM186AA6NE01 2351 aa3.3□□□□□ -1.88
VCAN-209ENST00000513016 I3L2K1 104 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms