RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TCL1BO95988 128 aa7.03□□□□□ -1.28
VCAN-208ENST00000512590 GUSBP1Q15486 140 aa7.03□□□□□ -1.28
VCAN-208ENST00000512590 TMEM75Q8N9X5 138 aa7.03□□□□□ -1.28
VCAN-208ENST00000512590 TEX49A0A1B0GTD5 131 aa7.03□□□□□ -1.28
VCAN-208ENST00000512590 SIVA1O15304 175 aa7.03□□□□□ -1.28
VCAN-208ENST00000512590 Q86TA4 180 aa7.03□□□□□ -1.28
VCAN-208ENST00000512590 IGHV2-70P01814 119 aa7.03□□□□□ -1.28
VCAN-208ENST00000512590 OCC1Q8TAD7 63 aa7.03□□□□□ -1.28
VCAN-208ENST00000512590 CTRLP40313 264 aa7.03□□□□□ -1.28
VCAN-208ENST00000512590 DDX60LQ5H9U9 1706 aaKnown RBP7.03□□□□□ -1.28
VCAN-208ENST00000512590 PRO0255Q9UI72 69 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 JMJD7-PLA2G4BH0Y9G9 81 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 IGLV3-32A0A0A0MS00 114 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 TRBV12-3P01733 135 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 COX7BP24311 80 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 COL18A1P39060 1754 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 HGFACQ04756 655 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 CROCCQ5TZA2 2017 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 HEATR5BQ9P2D3 2071 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 Q8N8P6 123 aa7.02□□□□□ -1.29
VCAN-208ENST00000512590 NHSQ6T4R5 1651 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 ABCA3Q99758 1704 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 LY6G6FQ5SQ64 297 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 WDR83OSQ9Y284 106 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 U3KQK5 164 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 F5P12259 2224 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 IGLV9-49A0A0B4J1Y8 123 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 PRSS46E5RG02 174 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 FGF6P10767 208 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 FOXI1Q12951 378 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 WDR86Q86TI4 376 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 SERP2Q8N6R1 65 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 Q8TCH9 128 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 HIST1H2BLQ99880 126 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 PPDPFQ9H3Y8 114 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 UNC13CQ8NB66 2214 aa7.01□□□□□ -1.29
VCAN-208ENST00000512590 IGLV2-8P01709 118 aa7□□□□□ -1.29
VCAN-208ENST00000512590 GRNP28799 593 aaKnown RBP7□□□□□ -1.29
VCAN-208ENST00000512590 ITGB4P16144 1822 aa7□□□□□ -1.29
VCAN-208ENST00000512590 C15orf62A8K5M9 175 aa7□□□□□ -1.29
VCAN-208ENST00000512590 VWCEQ96DN2 955 aa7□□□□□ -1.29
VCAN-208ENST00000512590 ZFP2Q6ZN57 461 aa7□□□□□ -1.29
VCAN-208ENST00000512590 FGF23Q9GZV9 251 aaPredicted RBP7□□□□□ -1.29
VCAN-208ENST00000512590 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
VCAN-208ENST00000512590 COL22A1Q8NFW1 1626 aaPredicted RBP7□□□□□ -1.29
VCAN-208ENST00000512590 FAM229AH3BQW9 127 aa7□□□□□ -1.29
VCAN-208ENST00000512590 TDRD6O60522 2096 aaKnown RBP7□□□□□ -1.29
VCAN-208ENST00000512590 CACNA1CQ13936 2221 aa7□□□□□ -1.29
VCAN-208ENST00000512590 J3QRE1 110 aa7□□□□□ -1.29
VCAN-208ENST00000512590 MED14OSP0DP75 135 aa7□□□□□ -1.29
VCAN-208ENST00000512590 BRK1Q8WUW1 75 aa7□□□□□ -1.29
VCAN-208ENST00000512590 SND1-IT1Q9HBX3 110 aa7□□□□□ -1.29
VCAN-208ENST00000512590 LECT2O14960 151 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 IL15RAQ13261 267 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 IGF2-ASQ6U949 168 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 CCDC88CQ9P219 2028 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 MYH15Q9Y2K3 1946 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 LAMA4Q16363 1823 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 CRYBA4P53673 196 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 C9orf62Q8N4C0 152 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 ZNRD1Q9P1U0 126 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 TMEM213A2RRL7 107 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 IGLV2-11P01706 119 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 SPANXA1Q9NS26 97 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 GNRH2O43555 120 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 DIDO1Q9BTC0 2240 aaKnown RBP6.99□□□□□ -1.29
VCAN-208ENST00000512590 RTTNQ86VV8 2226 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 DAZAP2Q15038 168 aaPredicted RBP6.99□□□□□ -1.29
VCAN-208ENST00000512590 LINC01590Q5TEZ4 76 aa6.99□□□□□ -1.29
VCAN-208ENST00000512590 NUP35Q8NFH5 326 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 IGHV4-30-4P0DP06 118 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 IGHV4-31P0DP07 118 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 C1orf134Q5TEV5 83 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 TMEM61Q8N0U2 210 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 SPANXDQ9BXN6 97 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 TRBV20-1A0A075B6N2 111 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 C2orf70A6NJV1 201 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 CRYGBP07316 175 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 ARTNQ5T4W7 220 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 ZNF843Q8N446 348 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 TPSG1Q9NRR2 321 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 A0A0J9YWU9 116 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 CCL25O15444 150 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 A0A1B0GUL6 1792 aa6.98□□□□□ -1.29
VCAN-208ENST00000512590 PLAC8L1A1L4L8 177 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 PRR4Q16378 134 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 NMSQ5H8A3 153 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 C16orf54Q6UWD8 224 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 MLST8Q9BVC4 326 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 NPDC1Q9NQX5 325 aaPredicted RBP6.97□□□□□ -1.29
VCAN-208ENST00000512590 ARFGEF3Q5TH69 2177 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 ZNF646O15015 1829 aaPredicted RBP6.97□□□□□ -1.29
VCAN-208ENST00000512590 PATJQ8NI35 1801 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 PIP4P1Q86T03 277 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 RTBDNQ9BSG5 229 aaPredicted RBP6.97□□□□□ -1.29
VCAN-208ENST00000512590 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 NDUFC2O95298 119 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 BLCAPP62952 87 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 PLA2G2CQ5R387 149 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 PSMB8P28062 276 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms