RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
NEAT1-201ENST00000499732 BOD1L2Q8IYS8 172 aa11.28□□□□□ -0.6
NEAT1-201ENST00000499732 Q8N6K4 173 aa11.28□□□□□ -0.6
NEAT1-201ENST00000499732 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
NEAT1-201ENST00000499732 OR9G4Q8NGQ1 327 aa11.28□□□□□ -0.6
NEAT1-201ENST00000499732 IGLV11-55A0A075B6I3 123 aa11.27□□□□□ -0.61
NEAT1-201ENST00000499732 SAA4P35542 130 aa11.27□□□□□ -0.61
NEAT1-201ENST00000499732 MFAP4P55083 255 aa11.27□□□□□ -0.61
NEAT1-201ENST00000499732 SRSF2Q01130 221 aaKnown RBP11.27□□□□□ -0.61
NEAT1-201ENST00000499732 COTL1Q14019 142 aa11.27□□□□□ -0.61
NEAT1-201ENST00000499732 HES1Q14469 280 aa11.27□□□□□ -0.61
NEAT1-201ENST00000499732 AMN1Q8IY45 258 aa11.27□□□□□ -0.61
NEAT1-201ENST00000499732 LINC01356Q8N9X3 169 aa11.27□□□□□ -0.61
NEAT1-201ENST00000499732 Q96MF0 132 aa11.27□□□□□ -0.61
NEAT1-201ENST00000499732 ASCL2Q99929 193 aa11.27□□□□□ -0.61
NEAT1-201ENST00000499732 SVEP1Q4LDE5 3571 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 TRAV8-6A0A0B4J262 113 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 A6NDN8 102 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 FAM106CPP0CH98 169 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 RPL7P18124 248 aaKnown RBP11.26□□□□□ -0.61
NEAT1-201ENST00000499732 HSD52Q0P140 79 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 FAM106AQ4KMX7 169 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 MRPL51Q4U2R6 128 aaKnown RBP11.26□□□□□ -0.61
NEAT1-201ENST00000499732 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 CR1P17927 2039 aa11.26□□□□□ -0.61
NEAT1-201ENST00000499732 CENPVL3A0A0U1RRI6 287 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 H3BRM9 83 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 SMAD7O15105 426 aaKnown RBP11.25□□□□□ -0.61
NEAT1-201ENST00000499732 BMI1P35226 326 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 C5orf64Q2M2E5 130 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 PSMG4Q5JS54 123 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 LOC389332A0A1B0GUA5 103 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 NPFFO15130 113 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 CACNG7P62955 275 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 RNF151Q2KHN1 245 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 PRR25Q96S07 402 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 HIF1ANQ9NWT6 349 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 RABAC1Q9UI14 185 aa11.25□□□□□ -0.61
NEAT1-201ENST00000499732 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
NEAT1-201ENST00000499732 IGLC6P0CF74 106 aa11.24□□□□□ -0.61
NEAT1-201ENST00000499732 S100A7P31151 101 aa11.24□□□□□ -0.61
NEAT1-201ENST00000499732 GTF2H5Q6ZYL4 71 aa11.24□□□□□ -0.61
NEAT1-201ENST00000499732 FER1L6-AS1Q8NA97 138 aa11.24□□□□□ -0.61
NEAT1-201ENST00000499732 MAPK1IP1LQ8NDC0 245 aa11.24□□□□□ -0.61
NEAT1-201ENST00000499732 IFI27L1Q96BM0 104 aa11.24□□□□□ -0.61
NEAT1-201ENST00000499732 FANCD2OSQ96PS1 177 aa11.24□□□□□ -0.61
NEAT1-201ENST00000499732 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 C9orf118A6NHY6 69 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 F8W735 103 aaPredicted RBP11.23□□□□□ -0.61
NEAT1-201ENST00000499732 K7ERU9 68 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 TMEM11P17152 192 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 CKS2P33552 79 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 THYN1Q9P016 225 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 TMSB15BA0A087X1C1 80 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 TTC9CQ8N5M4 171 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 AP1S3Q96PC3 154 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 CNFNQ9BYD5 112 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 C21orf62Q9NYP8 219 aa11.23□□□□□ -0.61
NEAT1-201ENST00000499732 ABCA1O95477 2261 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 IGKV2-40A0A087WW87 121 aaPredicted RBP11.22□□□□□ -0.61
NEAT1-201ENST00000499732 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 J3QLI3 93 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 SNAI2O43623 268 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 NPYP01303 97 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 IGKV2D-40P01614 121 aaPredicted RBP11.22□□□□□ -0.61
NEAT1-201ENST00000499732 EGR2P11161 476 aaPredicted RBP11.22□□□□□ -0.61
NEAT1-201ENST00000499732 FOXE3Q13461 319 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 LINC01559Q495D7 138 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 ZNF562Q6V9R5 426 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 VPS25Q9BRG1 176 aa11.22□□□□□ -0.61
NEAT1-201ENST00000499732 IGHV1-69DA0A0B4J2H0 117 aa11.21□□□□□ -0.61
NEAT1-201ENST00000499732 NCBP2LA6PVI3 153 aaKnown RBP11.21□□□□□ -0.61
NEAT1-201ENST00000499732 IGHV1-69P01742 117 aa11.21□□□□□ -0.61
NEAT1-201ENST00000499732 NDPQ00604 133 aa11.21□□□□□ -0.61
NEAT1-201ENST00000499732 TWIST1Q15672 202 aa11.21□□□□□ -0.61
NEAT1-201ENST00000499732 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.61
NEAT1-201ENST00000499732 ADAMTSL5Q6ZMM2 481 aa11.21□□□□□ -0.61
NEAT1-201ENST00000499732 SMR3AQ99954 134 aa11.21□□□□□ -0.61
NEAT1-201ENST00000499732 MAP1LC3AQ9H492 121 aa11.21□□□□□ -0.61
NEAT1-201ENST00000499732 NSD1Q96L73 2696 aaPredicted RBP11.21□□□□□ -0.61
NEAT1-201ENST00000499732 CSPG4Q6UVK1 2322 aa11.21□□□□□ -0.62
NEAT1-201ENST00000499732 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.62
NEAT1-201ENST00000499732 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.62
NEAT1-201ENST00000499732 TGFAP01135 160 aa11.21□□□□□ -0.62
NEAT1-201ENST00000499732 IGHV4-31P0DP07 118 aa11.21□□□□□ -0.62
NEAT1-201ENST00000499732 BCL6BQ8N143 479 aaPredicted RBP11.21□□□□□ -0.62
NEAT1-201ENST00000499732 Q8N9W7 124 aa11.21□□□□□ -0.62
NEAT1-201ENST00000499732 S4R3C0 116 aa11.2□□□□□ -0.62
NEAT1-201ENST00000499732 K7EP34 96 aa11.19□□□□□ -0.62
NEAT1-201ENST00000499732 LY6G6DO95868 133 aa11.19□□□□□ -0.62
NEAT1-201ENST00000499732 KIR3DS1Q14943 382 aa11.19□□□□□ -0.62
NEAT1-201ENST00000499732 IGHV4-38-2P0DP08 117 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms