RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 NAA38Q9BRA0 125 aaKnown RBP6.85□□□□□ -1.31
CSMD2-209ENST00000489419 NRN1Q9NPD7 142 aa6.85□□□□□ -1.31
CSMD2-209ENST00000489419 A0A1B0GUT8 65 aa6.85□□□□□ -1.31
CSMD2-209ENST00000489419 FABP5P3A8MUU1 101 aa6.85□□□□□ -1.31
CSMD2-209ENST00000489419 M0R3E3 92 aa6.85□□□□□ -1.31
CSMD2-209ENST00000489419 BUB3O43684 328 aa6.85□□□□□ -1.31
CSMD2-209ENST00000489419 APOHP02749 345 aaPredicted RBP6.85□□□□□ -1.31
CSMD2-209ENST00000489419 GPR183P32249 361 aa6.85□□□□□ -1.31
CSMD2-209ENST00000489419 ATP5G2Q06055 141 aa6.85□□□□□ -1.31
CSMD2-209ENST00000489419 JMJD8Q96S16 334 aa6.85□□□□□ -1.31
CSMD2-209ENST00000489419 SMAD5-AS1Q9Y6J3 95 aa6.85□□□□□ -1.31
CSMD2-209ENST00000489419 TACC2O95359 2948 aa6.84□□□□□ -1.31
CSMD2-209ENST00000489419 TRAV41A0A0B4J266 112 aa6.84□□□□□ -1.31
CSMD2-209ENST00000489419 SH2D7A6NKC9 451 aaPredicted RBP6.84□□□□□ -1.31
CSMD2-209ENST00000489419 NUDT3O95989 172 aa6.84□□□□□ -1.31
CSMD2-209ENST00000489419 SRSF2Q01130 221 aaKnown RBP6.84□□□□□ -1.31
CSMD2-209ENST00000489419 SLC50A1Q9BRV3 221 aa6.84□□□□□ -1.31
CSMD2-209ENST00000489419 MAP1LC3CQ9BXW4 147 aa6.84□□□□□ -1.31
CSMD2-209ENST00000489419 C7orf71A4D174 169 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 RBAKDNA6NC62 111 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 F5H768 121 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 G3V318 75 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 H3BUA1 57 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 CHEK1O14757 476 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 IGF1P05019 195 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 SPINK8P0C7L1 97 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 CRIP1P50238 77 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 OR2K2Q8NGT1 345 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 CHCHD1Q96BP2 118 aaKnown RBP6.84□□□□□ -1.32
CSMD2-209ENST00000489419 CCDC140Q96MF4 163 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 CYSLTR1Q9Y271 337 aa6.84□□□□□ -1.32
CSMD2-209ENST00000489419 WNK2Q9Y3S1 2297 aa6.83□□□□□ -1.32
CSMD2-209ENST00000489419 RELNP78509 3460 aa6.83□□□□□ -1.32
CSMD2-209ENST00000489419 LINC01548A6NM66 108 aa6.83□□□□□ -1.32
CSMD2-209ENST00000489419 HSBP1O75506 76 aa6.83□□□□□ -1.32
CSMD2-209ENST00000489419 TMEM78Q5T7P6 136 aa6.83□□□□□ -1.32
CSMD2-209ENST00000489419 BORCS7Q96B45 105 aa6.83□□□□□ -1.32
CSMD2-209ENST00000489419 MRPL53Q96EL3 112 aaKnown RBP6.83□□□□□ -1.32
CSMD2-209ENST00000489419 PRR25Q96S07 402 aa6.83□□□□□ -1.32
CSMD2-209ENST00000489419 MCRIP2Q9BUT9 160 aaKnown RBP6.83□□□□□ -1.32
CSMD2-209ENST00000489419 ST20Q9HBF5 79 aa6.83□□□□□ -1.32
CSMD2-209ENST00000489419 U3KQE9 123 aa6.83□□□□□ -1.32
CSMD2-209ENST00000489419 C9orf118A6NHY6 69 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 MSMBP08118 114 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 NHLRC4P0CG21 123 aaPredicted RBP6.82□□□□□ -1.32
CSMD2-209ENST00000489419 PMCHP20382 165 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 MRPL23Q16540 153 aaKnown RBP6.82□□□□□ -1.32
CSMD2-209ENST00000489419 LCN12Q6JVE5 192 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 CLEC19AQ6UXS0 136 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 METTL26Q96S19 204 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 IGHV4-30-2A0A087WSY4 118 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 TRAV40A0A0B4J280 105 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 A0A0G2JLM5 398 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 CLPSL1A2RUU4 121 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 A6NDX4 124 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 GAGE12JA6NER3 117 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 B4DSR2 109 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 GAGE7O76087 117 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 GAGE12FP0CL80 117 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 GAGE12GP0CL81 117 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 GAGE12IP0CL82 117 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 GAGE4Q13068 117 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 FOXE3Q13461 319 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 PMCHL1Q16048 86 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 MRAPQ8TCY5 172 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 USMG5Q96IX5 58 aa6.82□□□□□ -1.32
CSMD2-209ENST00000489419 TRAV9-2A0A087WT02 112 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 IGHG2P01859 326 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 SLC25A16P16260 332 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 SEC61GP60059 68 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 ZNF493Q6ZR52 646 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 C8orf49Q96NF6 230 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 SPANXA1Q9NS26 97 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 SH2D1AO60880 128 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 TMEM219Q86XT9 240 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 DNAJC30Q96LL9 226 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 AP1S3Q96PC3 154 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 TM2D2Q9BX73 214 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 SPANXB1Q9NS25 103 aaPredicted RBP6.81□□□□□ -1.32
CSMD2-209ENST00000489419 ZNF580Q9UK33 172 aa6.81□□□□□ -1.32
CSMD2-209ENST00000489419 IGKV2-40A0A087WW87 121 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-209ENST00000489419 IGKV2D-40P01614 121 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-209ENST00000489419 OR5AL1P0C617 328 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 C3orf79P0CE67 100 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 BRD3OSQ6XYD6 125 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 KIR2DL5BQ8NHK3 375 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 SPAG8Q99932 426 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-209ENST00000489419 SELENOKQ9Y6D0 94 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 IGHV3OR16-10A0A075B7F0 116 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 CCDC179H3BU77 68 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 M0R2Z0 102 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 TRGV3P03979 118 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 IGHV4-38-2P0DP08 117 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 IGLL1P15814 213 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 NTF3P20783 257 aa6.8□□□□□ -1.32
CSMD2-209ENST00000489419 PPIFP30405 207 aaKnown RBP6.8□□□□□ -1.32
CSMD2-209ENST00000489419 RNASEKQ6P5S7 137 aaKnown RBP6.8□□□□□ -1.32
CSMD2-209ENST00000489419 Q71RC1 249 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms