RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 TCRBP04435 133 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 IL4P05112 153 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 OR10J4P0C629 311 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 PTHLHP12272 177 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 NQO2P16083 231 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 PSMB9P28065 219 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 BTCP35070 178 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 ATP6V1E1P36543 226 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 CXCL5P42830 114 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 HSPA13P48723 471 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 TCL1AP56279 114 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 YPEL3P61236 119 aaPredicted RBP1.07□□□□□ -2.24
USH2A-204ENST00000481786 RHOBP62745 196 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 RPL30P62888 115 aaKnown RBP1.07□□□□□ -2.24
USH2A-204ENST00000481786 CTAG1AP78358 180 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 SS18Q15532 418 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 MAJINQ3KP22 176 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 KRTAP13-2Q52LG2 175 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 SPINK9Q5DT21 86 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 Q5W150 140 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 GLYATQ6IB77 296 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 PCP2Q8IVA1 136 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 GID4Q8IVV7 300 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 CDH26Q8IXH8 852 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 IFT20Q8IY31 132 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 DHRSXQ8N5I4 330 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 C11orf72Q8NBR9 251 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 DERL3Q96Q80 235 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 MYCBPQ99417 103 aaPredicted RBP1.07□□□□□ -2.24
USH2A-204ENST00000481786 NIPSNAP1Q9BPW8 284 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 PAIP2Q9BPZ3 127 aaKnown RBP1.07□□□□□ -2.24
USH2A-204ENST00000481786 RETNLBQ9BQ08 111 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 GINS4Q9BRT9 223 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 NAA50Q9GZZ1 169 aaKnown RBP1.07□□□□□ -2.24
USH2A-204ENST00000481786 GTSF1LQ9H1H1 148 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 OR51M1Q9H341 326 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 FGF20Q9NP95 211 aaPredicted RBP1.07□□□□□ -2.24
USH2A-204ENST00000481786 PLEKHJ1Q9NW61 149 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 CMTM6Q9NX76 183 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 FKBP11Q9NYL4 201 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 CKLFQ9UBR5 152 aa1.07□□□□□ -2.24
USH2A-204ENST00000481786 A0A087WWC5 75 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 F8WDY8 70 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 SULT1C2O00338 296 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 NME4O00746 187 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 NDUFS6O75380 124 aaKnown RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 SNAPC5O75971 98 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 HLA-DQA1P01909 254 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 CDK1P06493 297 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 CD3GP09693 182 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 IGLC1P0CG04 106 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 UBBP0CG47 229 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 RD3LP0DJH9 198 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 CD37P11049 281 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 PTMSP20962 102 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 SNCAP37840 140 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 RPL5P46777 297 aaKnown RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 ZNF138P52744 262 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 SUB1P53999 127 aaKnown RBP eCLIP1.06□□□□□ -2.24
USH2A-204ENST00000481786 POLR2GP62487 172 aaKnown RBP eCLIP1.06□□□□□ -2.24
USH2A-204ENST00000481786 SUPT4H1P63272 117 aaKnown RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 ERHP84090 104 aaKnown RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 COX6A2Q02221 97 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 HIST1H1AQ02539 215 aaPredicted RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 MRPL28Q13084 256 aaKnown RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 TMED1Q13445 227 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 KIAA0087Q14695 138 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 MAPRE2Q15555 327 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 IDNKQ5T6J7 187 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 OR2T5Q6IEZ7 315 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 LINC00173Q6ZV60 143 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 FP248Q71RG6 208 aaPredicted RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 NIT1Q86X76 327 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 JAGN1Q8N5M9 183 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 OR8A1Q8NGG7 326 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 OR10G4Q8NGN3 311 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 OR1S2Q8NGQ3 325 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 OR2T29Q8NH02 315 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 OR5AK2Q8NH90 309 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 LGALS14Q8TCE9 139 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 UBE2WQ96B02 151 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 PGLYRP3Q96LB9 341 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 DNAJC30Q96LL9 226 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 HOPXQ9BPY8 73 aaPredicted RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 CMSS1Q9BQ75 279 aaKnown RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 ZNF2Q9BSG1 426 aaPredicted RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 CHCHD7Q9BUK0 85 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 PECRQ9BY49 303 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 SAMD10Q9BYL1 202 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 RPP21Q9H633 154 aaKnown RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 C8orf4Q9NR00 106 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 TAS2R8Q9NYW2 309 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 COMMD9Q9P000 198 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 AK3Q9UIJ7 227 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 PRNDQ9UKY0 176 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 PKIGQ9Y2B9 76 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 AK6Q9Y3D8 172 aaKnown RBP1.06□□□□□ -2.24
USH2A-204ENST00000481786 KLF12Q9Y4X4 402 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 OR51B2Q9Y5P1 312 aa1.06□□□□□ -2.24
USH2A-204ENST00000481786 IGLV10-54A0A075B6I4 117 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms