RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 SBSPONQ8IVN8 264 aa2.15□□□□□ -2.07
BRAF-203ENST00000479537 DERL1Q9BUN8 251 aa2.15□□□□□ -2.07
BRAF-203ENST00000479537 PCBD2Q9H0N5 130 aa2.15□□□□□ -2.07
BRAF-203ENST00000479537 C11orf68Q9H3H3 251 aaKnown RBP2.15□□□□□ -2.07
BRAF-203ENST00000479537 MRPL27Q9P0M9 148 aaKnown RBP2.15□□□□□ -2.07
BRAF-203ENST00000479537 MYCBP2O75592 4640 aa2.15□□□□□ -2.07
BRAF-203ENST00000479537 FAT2Q9NYQ8 4349 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 HUWE1Q7Z6Z7 4374 aaKnown RBP2.14□□□□□ -2.07
BRAF-203ENST00000479537 TRAV9-1A0A075B6T8 112 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 TRBV10-2A0A0K0K1G8 114 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 SMIM9A6NGZ8 99 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 CLDN25C9JDP6 229 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 ATP6V1G2-DDX39BF2Z307 99 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 M0R233 179 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 TTRP02766 147 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 RPS20P60866 119 aaKnown RBP2.14□□□□□ -2.07
BRAF-203ENST00000479537 C7orf65Q6ZTY9 151 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 BPIFA4PQ86YQ2 179 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 NAT14Q8WUY8 206 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 PROK2Q9HC23 129 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 SLC22A13Q9Y226 551 aa2.14□□□□□ -2.07
BRAF-203ENST00000479537 MACF1Q9UPN3 7388 aaKnown RBP2.13□□□□□ -2.07
BRAF-203ENST00000479537 A0A087WUJ7 227 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 MEIKINA0A087WXM9 373 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 NUPR2A6NF83 97 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 OR51F1A6NGY5 319 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 TRAPPC2LH3BP13 241 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 MAGEA12P43365 314 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 FXYD2P54710 66 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 SUPT4H1P63272 117 aaKnown RBP2.13□□□□□ -2.07
BRAF-203ENST00000479537 FADDQ13158 208 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 EDDM3AQ14507 147 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 TAF1AQ15573 450 aaPredicted RBP2.13□□□□□ -2.07
BRAF-203ENST00000479537 MOGQ16653 247 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 MED12LQ86YW9 2145 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 DEFB108BQ8NET1 73 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 DNAJC9Q8WXX5 260 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 TMEM106AQ96A25 262 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 BORCS7Q96B45 105 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 NIPSNAP1Q9BPW8 284 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 GINS4Q9BRT9 223 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 TMEM147Q9BVK8 224 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 GLTPQ9NZD2 209 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 AMMECR1Q9Y4X0 333 aaPredicted RBP2.13□□□□□ -2.07
BRAF-203ENST00000479537 TMEM56-RWDD3S4R434 201 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 ARFGEF3Q5TH69 2177 aa2.13□□□□□ -2.07
BRAF-203ENST00000479537 FAM236DA0A1B0GTK5 79 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 EXOC1LA0A1B0GW35 172 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 TCRBV4S1A1TA0A5B7 111 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 SDCBPO00560 298 aaPredicted RBP2.12□□□□□ -2.07
BRAF-203ENST00000479537 CNIH1O95406 144 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 CRPP02741 224 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 METTL15P1P0C7V9 234 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 FAM236CP0DP71 79 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 CDK10Q15131 360 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 KISS1Q15726 138 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 SPANXN3Q5MJ09 141 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 Q6ZRN7 208 aaPredicted RBP2.12□□□□□ -2.07
BRAF-203ENST00000479537 OR8B3Q8NGG8 313 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 OR13C4Q8NGS5 318 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 RASSF5Q8WWW0 418 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 C11orf40Q8WZ69 217 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 TOMM6Q96B49 74 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 HSPB9Q9BQS6 159 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 CCDC90BQ9GZT6 254 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 DCSTAMPQ9H295 470 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 BAIAP2Q9UQB8 552 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 PRELID3BQ9Y3B1 194 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 ARL5AQ9Y689 179 aa2.12□□□□□ -2.07
BRAF-203ENST00000479537 DOCK11Q5JSL3 2073 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 PLECQ15149 4684 aaKnown RBP2.11□□□□□ -2.07
BRAF-203ENST00000479537 TRAV26-2A0A0B4J265 109 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 LOC285095A0A1B0GVY8 99 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 IGKV1-5P01602 117 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 UBBP0CG47 229 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 CASP1P29466 404 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 AKR1C3P42330 323 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 REEP5Q00765 189 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 PPP1R2P3Q6NXS1 205 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 FAM173BQ6P4H8 233 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 KRT222Q8N1A0 295 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 MCEEQ96PE7 176 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 SCGB3A1Q96QR1 104 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 TSPAN32Q96QS1 320 aa2.11□□□□□ -2.07
BRAF-203ENST00000479537 SNRNP25Q9BV90 132 aaKnown RBP2.11□□□□□ -2.07
BRAF-203ENST00000479537 SORL1Q92673 2214 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 IGKV1D-43A0A0B4J1Z2 117 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 MRPL33O75394 65 aaKnown RBP2.1□□□□□ -2.07
BRAF-203ENST00000479537 IFNA10P01566 189 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 IFNA14P01570 189 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 GPX2P18283 190 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 CCL8P80075 99 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 PLCXD2Q0VAA5 305 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 ELOBQ15370 118 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 ARHGAP11BQ3KRB8 267 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 AAED1Q7RTV5 226 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 CLVS1Q8IUQ0 354 aaPredicted RBP2.1□□□□□ -2.07
BRAF-203ENST00000479537 PDZD9Q8IXQ8 264 aa2.1□□□□□ -2.07
BRAF-203ENST00000479537 AIF1LQ9BQI0 150 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms