RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-215	ENST00000475319	MDP1	Q86V88	176 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	NDUFA11	Q86Y39	141 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	SRSF12	Q8WXF0	261 aa	Known RBP	4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	METTL26	Q96S19	204 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	PAXX	Q9BUH6	204 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	DAZ3	Q9NR90	486 aa	Known RBP	4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	ZNF355P	Q9NSJ1	428 aa		4.59	□□□□□ -1.67
ECHDC1-215	ENST00000475319	CDH23	Q9H251	3354 aa		4.59	□□□□□ -1.68
ECHDC1-215	ENST00000475319	MYO16	Q9Y6X6	1858 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319		A0A096LNJ9	63 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	PMS2P5	A8MQ11	134 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	INS-IGF2	F8WCM5	200 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	NGF	P01138	241 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	GP1BB	P13224	206 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ZNF823	P16415	610 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	TFF3	Q07654	80 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ERCC8	Q13216	396 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319		Q6ZPA2	131 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319		Q75L30	129 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	RPP21	Q9H633	154 aa	Known RBP	4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ZNF492	Q9P255	531 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	SLC25A15	Q9Y619	301 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	SPTBN4	Q9H254	2564 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319	EYS	Q5T1H1	3165 aa		4.58	□□□□□ -1.68
ECHDC1-215	ENST00000475319		A0A0B4J2C4	111 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	TEX49	A0A1B0GTD5	131 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	WISP2	O76076	250 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ZNF883	P0CG24	379 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	CCL1	P22362	96 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	PLN	P26678	52 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	SEC61B	P60468	96 aa	Known RBP	4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	RIG	Q13278	110 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	C2orf82	Q6UX34	121 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ZNF818P	Q6ZRF7	136 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	TMEM243	Q9BU79	118 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	PRO1854	Q9UHT4	67 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	DOCK8	Q8NF50	2099 aa		4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	EP300	Q09472	2414 aa	Predicted RBP	4.57	□□□□□ -1.68
ECHDC1-215	ENST00000475319	IGLV1-36	A0A0B4J1U3	117 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319		A0A0G2JRQ6	117 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	SS18L1	O75177	396 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	DUT	P33316	252 aa	Known RBP	4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	UBE2E1	P51965	193 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	KISS1	Q15726	138 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	KRTAP27-1	Q3LI81	207 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319		Q8N7P7	452 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	THAP8	Q8NA92	274 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	UBE2E2	Q96LR5	201 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	NABP2	Q9BQ15	211 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	TAC3	Q9UHF0	121 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ANAPC1	Q9H1A4	1944 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	PLXNA2	O75051	1894 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	GVINP1	Q7Z2Y8	2422 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	TRAV41	A0A0B4J266	112 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	IGHV1-58	A0A0C4DH39	117 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319		A0A0D9SEW6	157 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	LINC01546	A6NGU7	62 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	RPS27	P42677	84 aa	Known RBP	4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	EDDM3B	P56851	147 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ORMDL2	Q53FV1	153 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	KRTAP5-11	Q6L8G4	156 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ZNF497	Q6ZNH5	498 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	FP248	Q71RG6	208 aa	Predicted RBP	4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319		U3KQK5	164 aa		4.56	□□□□□ -1.68
ECHDC1-215	ENST00000475319	PCSK5	Q92824	1860 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	GREB1	Q4ZG55	1949 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	EFNA2	O43921	213 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	BCE1	O60756	84 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	IFI27	P40305	119 aa	Predicted RBP	4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ZNF138	P52744	262 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	APOC4	P55056	127 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	PAX8	Q06710	450 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	ZNF799	Q96GE5	643 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	C17orf77	Q96MU5	243 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	CYSTM1	Q9H1C7	97 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	PLXNB3	Q9ULL4	1909 aa		4.55	□□□□□ -1.68
ECHDC1-215	ENST00000475319	KIAA2026	Q5HYC2	2103 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	MED12L	Q86YW9	2145 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	NDUFB3	O43676	98 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	LGALS3	P17931	250 aa	Known RBP	4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	SAA4	P35542	130 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	PROK1	P58294	105 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	KRTAP10-7	P60409	375 aa	Predicted RBP	4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	SNRPD3	P62318	126 aa	Known RBP	4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	FOXF2	Q12947	444 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	C9orf139	Q6ZV77	190 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	CD177	Q8N6Q3	437 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	MAPKAPK5-AS1	Q8N8E1	139 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319		Q8N8P6	123 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	DAND5	Q8N907	189 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	VSIG2	Q96IQ7	327 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319		Q9H8V8	135 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	CACNA1B	Q00975	2339 aa		4.54	□□□□□ -1.68
ECHDC1-215	ENST00000475319	CACNA1A	O00555	2505 aa		4.53	□□□□□ -1.68
ECHDC1-215	ENST00000475319	TRBV7-1	A0A0A6YYK4	115 aa		4.53	□□□□□ -1.68
ECHDC1-215	ENST00000475319	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.53	□□□□□ -1.68
ECHDC1-215	ENST00000475319	IGHV4-28	A0A0C4DH34	117 aa		4.53	□□□□□ -1.68

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