RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 LINC00173Q6ZV60 143 aa8.76□□□□□ -1.01
HPS1-208ENST00000467246 ORAOV1Q8WV07 137 aa8.76□□□□□ -1.01
HPS1-208ENST00000467246 BORCS7Q96B45 105 aa8.76□□□□□ -1.01
HPS1-208ENST00000467246 NAA38Q9BRA0 125 aaKnown RBP8.76□□□□□ -1.01
HPS1-208ENST00000467246 SLC50A1Q9BRV3 221 aa8.76□□□□□ -1.01
HPS1-208ENST00000467246 A0A096LNT2 108 aa8.76□□□□□ -1.01
HPS1-208ENST00000467246 hDV102S1A0JD36 115 aa8.76□□□□□ -1.01
HPS1-208ENST00000467246 TMEM213A2RRL7 107 aa8.76□□□□□ -1.01
HPS1-208ENST00000467246 Q6AWC8 147 aa8.76□□□□□ -1.01
HPS1-208ENST00000467246 NAV2Q8IVL1 2488 aa8.76□□□□□ -1.01
HPS1-208ENST00000467246 FAM181BA6NEQ2 426 aa8.75□□□□□ -1.01
HPS1-208ENST00000467246 SLC25A16P16260 332 aa8.75□□□□□ -1.01
HPS1-208ENST00000467246 IL17RELQ6ZVW7 336 aa8.75□□□□□ -1.01
HPS1-208ENST00000467246 ATP6V0BQ99437 205 aa8.75□□□□□ -1.01
HPS1-208ENST00000467246 SMAD7O15105 426 aaKnown RBP8.75□□□□□ -1.01
HPS1-208ENST00000467246 KRTAP10-9P60411 292 aa8.75□□□□□ -1.01
HPS1-208ENST00000467246 AMMECR1LQ6DCA0 310 aa8.75□□□□□ -1.01
HPS1-208ENST00000467246 LINC01356Q8N9X3 169 aa8.75□□□□□ -1.01
HPS1-208ENST00000467246 AGPAT4-IT1Q9H0P7 198 aa8.75□□□□□ -1.01
HPS1-208ENST00000467246 ORM1P02763 201 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 CSN3P07498 182 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 GATA3P23771 443 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 BMI1P35226 326 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 DEFB112Q30KQ8 113 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 TMEM95Q3KNT9 176 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 GATD1Q8NB37 220 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 GLMPQ8WWB7 406 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 SAP30O75446 220 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 TGFAP01135 160 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 IGHV4-59P01825 116 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 USMG5Q96IX5 58 aa8.74□□□□□ -1.01
HPS1-208ENST00000467246 A0A1B0GW15 77 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 RBAKDNA6NC62 111 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 NUDT3O95989 172 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 OR4X2Q8NGF9 303 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 MXRA5Q9NR99 2828 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 IGHV1-24A0A0C4DH33 117 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 C2orf70A6NJV1 201 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 FABP5P3A8MUU1 101 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 IGLV1-40P01703 118 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 PSMG3-AS1Q96PY0 264 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 CST9LQ9H4G1 147 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 H3BUA1 57 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 NDUFA4O00483 81 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 BRI3O95415 125 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 FER1L6-AS1Q8NA97 138 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 CHCHD1Q96BP2 118 aaKnown RBP8.73□□□□□ -1.01
HPS1-208ENST00000467246 C16orf92Q96LL3 132 aa8.73□□□□□ -1.01
HPS1-208ENST00000467246 RNF223E7ERA6 249 aa8.72□□□□□ -1.01
HPS1-208ENST00000467246 IGLC6P0CF74 106 aa8.72□□□□□ -1.01
HPS1-208ENST00000467246 GPHB5Q86YW7 130 aa8.72□□□□□ -1.01
HPS1-208ENST00000467246 KLHDC1Q8N7A1 406 aa8.72□□□□□ -1.01
HPS1-208ENST00000467246 C20orf173Q96LM9 149 aa8.72□□□□□ -1.01
HPS1-208ENST00000467246 K7EP13 123 aa8.72□□□□□ -1.01
HPS1-208ENST00000467246 CFHR3Q02985 330 aa8.72□□□□□ -1.01
HPS1-208ENST00000467246 TWIST1Q15672 202 aa8.72□□□□□ -1.01
HPS1-208ENST00000467246 C11orf21Q9P2W6 132 aa8.72□□□□□ -1.01
HPS1-208ENST00000467246 RPS20P60866 119 aaKnown RBP8.71□□□□□ -1.01
HPS1-208ENST00000467246 OCIAD2Q56VL3 154 aa8.71□□□□□ -1.01
HPS1-208ENST00000467246 TMEM78Q5T7P6 136 aa8.71□□□□□ -1.01
HPS1-208ENST00000467246 FAM104BQ5XKR9 115 aa8.71□□□□□ -1.01
HPS1-208ENST00000467246 Q6ZQT7 251 aa8.71□□□□□ -1.01
HPS1-208ENST00000467246 MSRB1Q9NZV6 116 aa8.71□□□□□ -1.01
HPS1-208ENST00000467246 D6R8Y8 96 aa8.71□□□□□ -1.02
HPS1-208ENST00000467246 C10orf99Q6UWK7 81 aa8.71□□□□□ -1.02
HPS1-208ENST00000467246 MRPL53Q96EL3 112 aaKnown RBP8.71□□□□□ -1.02
HPS1-208ENST00000467246 NPFFR1Q9GZQ6 430 aa8.71□□□□□ -1.02
HPS1-208ENST00000467246 DOPEY2Q9Y3R5 2298 aa8.7□□□□□ -1.02
HPS1-208ENST00000467246 IGKV3D-20A0A0C4DH25 116 aa8.7□□□□□ -1.02
HPS1-208ENST00000467246 TAX1BP3O14907 124 aa8.7□□□□□ -1.02
HPS1-208ENST00000467246 DEFB1P60022 68 aa8.7□□□□□ -1.02
HPS1-208ENST00000467246 TM4SF20Q53R12 229 aa8.7□□□□□ -1.02
HPS1-208ENST00000467246 C9orf47Q6ZRZ4 202 aa8.7□□□□□ -1.02
HPS1-208ENST00000467246 TEX15Q9BXT5 2789 aa8.7□□□□□ -1.02
HPS1-208ENST00000467246 CREBBPQ92793 2442 aa8.7□□□□□ -1.02
HPS1-208ENST00000467246 IGKV3-7A0A075B6H7 116 aa8.7□□□□□ -1.02
HPS1-208ENST00000467246 RPL11P62913 178 aaKnown RBP8.7□□□□□ -1.02
HPS1-208ENST00000467246 SRSF2Q01130 221 aaKnown RBP8.7□□□□□ -1.02
HPS1-208ENST00000467246 A0A0G2JLM5 398 aa8.69□□□□□ -1.02
HPS1-208ENST00000467246 LEPROTL1O95214 131 aa8.69□□□□□ -1.02
HPS1-208ENST00000467246 EDN2P20800 178 aa8.69□□□□□ -1.02
HPS1-208ENST00000467246 LINC01559Q495D7 138 aa8.69□□□□□ -1.02
HPS1-208ENST00000467246 MRPL51Q4U2R6 128 aaKnown RBP8.69□□□□□ -1.02
HPS1-208ENST00000467246 TRAV8-6A0A0B4J262 113 aa8.69□□□□□ -1.02
HPS1-208ENST00000467246 LOC389332A0A1B0GUA5 103 aa8.69□□□□□ -1.02
HPS1-208ENST00000467246 FAM106AQ4KMX7 169 aa8.69□□□□□ -1.02
HPS1-208ENST00000467246 C9orf139Q6ZV77 190 aa8.69□□□□□ -1.02
HPS1-208ENST00000467246 TMEM70Q9BUB7 260 aa8.69□□□□□ -1.02
HPS1-208ENST00000467246 TRAV9-2A0A087WT02 112 aa8.68□□□□□ -1.02
HPS1-208ENST00000467246 SMKR1H3BMG3 65 aa8.68□□□□□ -1.02
HPS1-208ENST00000467246 J3QLI3 93 aa8.68□□□□□ -1.02
HPS1-208ENST00000467246 SOCS3O14543 225 aa8.68□□□□□ -1.02
HPS1-208ENST00000467246 IFI27P40305 119 aaPredicted RBP8.68□□□□□ -1.02
HPS1-208ENST00000467246 PRSS3P2Q8NHM4 247 aa8.68□□□□□ -1.02
HPS1-208ENST00000467246 PRELID3AQ96N28 172 aa8.68□□□□□ -1.02
HPS1-208ENST00000467246 RHPN1-AS1Q9BWJ2 59 aa8.68□□□□□ -1.02
HPS1-208ENST00000467246 U3KQK5 164 aa8.68□□□□□ -1.02
HPS1-208ENST00000467246 APCP25054 2843 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms