RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 IGHV3-23P01764 117 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 LYNX1P0DP58 116 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 RPL7P18124 248 aaKnown RBP7.14□□□□□ -1.27
CAPN3-206ENST00000397163 MFAP4P55083 255 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 PSMG4Q5JS54 123 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 SMIM20Q8N5G0 67 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 IGFBPL1Q8WX77 278 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 RNF185Q96GF1 192 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 KIR2DL4Q99706 377 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 NXT2Q9NPJ8 142 aaKnown RBP7.14□□□□□ -1.27
CAPN3-206ENST00000397163 HHLA3Q9XRX5 114 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 LOC107984156A0A0G2JMH3 177 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 A0A0G2JNJ9 132 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 IGLC6P0CF74 106 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 GATA1P15976 413 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-206ENST00000397163 HLA-DMBP28068 263 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 Q6ZS92 163 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 ARL17AQ8IVW1 177 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 TTC9CQ8N5M4 171 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 TMEM158Q8WZ71 300 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 RNF5Q99942 180 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 TM2D2Q9BX73 214 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 PGPEP1Q9NXJ5 209 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 Q9UFV3 132 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 ERG28Q9UKR5 140 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 ZGRF1Q86YA3 2104 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 TRAV40A0A0B4J280 105 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 DPM2O94777 84 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 PSMB2P49721 201 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 SMCPP49901 116 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-206ENST00000397163 HES1Q14469 280 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 PIFOQ8TCI5 191 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 ONECUT1Q9UBC0 465 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 TMEM8BA6NDV4 472 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 SHISA9B4DS77 424 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 NBR2O15453 112 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 NCOR2Q9Y618 2525 aa7.13□□□□□ -1.27
CAPN3-206ENST00000397163 IGHV3OR16-8A0A075B7F1 116 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 H3BVH4 76 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 APC2O95996 2303 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 C1QTNF4Q9BXJ3 329 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 CEP295Q9C0D2 2601 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 A6NJY4 79 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 E7EQL1 145 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 ATP5LO75964 103 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 RRN3P1Q2M238 152 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 IGFL3Q6UXB1 125 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 ZNF502Q8TBZ5 544 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 ZMAT4Q9H898 229 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 C21orf62Q9NYP8 219 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 CACNA1AO00555 2505 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 FABP5P3A8MUU1 101 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 NDUFA3O95167 84 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 COX8CQ7Z4L0 72 aa7.12□□□□□ -1.27
CAPN3-206ENST00000397163 POLEQ07864 2286 aa7.11□□□□□ -1.27
CAPN3-206ENST00000397163 IGHV3-35A0A0C4DH35 117 aa7.11□□□□□ -1.27
CAPN3-206ENST00000397163 ERCC8Q13216 396 aa7.11□□□□□ -1.27
CAPN3-206ENST00000397163 ZFP2Q6ZN57 461 aa7.11□□□□□ -1.27
CAPN3-206ENST00000397163 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
CAPN3-206ENST00000397163 C3orf56Q8N813 242 aa7.11□□□□□ -1.27
CAPN3-206ENST00000397163 MYOZ3Q8TDC0 251 aa7.11□□□□□ -1.27
CAPN3-206ENST00000397163 MRPL35Q9NZE8 188 aaKnown RBP7.11□□□□□ -1.27
CAPN3-206ENST00000397163 TRBV7-9A0A0J9YWB2 115 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 KLRD1Q13241 179 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 DTX2Q86UW9 622 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 IGLV11-55A0A075B6I3 123 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 LY6LH3BQJ8 138 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 GAGE5Q13069 117 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 GAGE6Q13070 117 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 LINC01559Q495D7 138 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 Q8N8P6 123 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 DPM3Q9P2X0 92 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 WNK2Q9Y3S1 2297 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 OR11H12B2RN74 326 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 F8W735 103 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-206ENST00000397163 CCDC179H3BU77 68 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 DYNAPQ8N1N2 210 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 OR11H1Q8NG94 326 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 OR11H2Q8NH07 326 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 SMAD5-AS1Q9Y6J3 95 aa7.1□□□□□ -1.27
CAPN3-206ENST00000397163 LINC01546A6NGU7 62 aa7.09□□□□□ -1.27
CAPN3-206ENST00000397163 NCBP2LA6PVI3 153 aaKnown RBP7.09□□□□□ -1.27
CAPN3-206ENST00000397163 ZNF575Q86XF7 245 aa7.09□□□□□ -1.27
CAPN3-206ENST00000397163 CARD19Q96LW7 228 aa7.09□□□□□ -1.27
CAPN3-206ENST00000397163 CNFNQ9BYD5 112 aa7.09□□□□□ -1.27
CAPN3-206ENST00000397163 LINC01549A6NIU2 74 aa7.09□□□□□ -1.27
CAPN3-206ENST00000397163 PRAC2D3DTV9 90 aa7.09□□□□□ -1.27
CAPN3-206ENST00000397163 SCGB2A1O75556 95 aa7.09□□□□□ -1.27
CAPN3-206ENST00000397163 IGHG4P01861 327 aa7.09□□□□□ -1.27
CAPN3-206ENST00000397163 CFAP126Q5VTH2 177 aa7.09□□□□□ -1.27
CAPN3-206ENST00000397163 MORN3Q6PF18 240 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-206ENST00000397163 BRI3O95415 125 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 PRTN3P24158 256 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 IL17RELQ6ZVW7 336 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 KLK15Q9H2R5 256 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 RELNP78509 3460 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 TRAV26-2A0A0B4J265 109 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 TRGV3P03979 118 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 SRSF2Q01130 221 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms