RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 SH2D1AO60880 128 aa14.22□□□□□ -0.13
TRAF3-203ENST00000392745 TM4SF20Q53R12 229 aa14.22□□□□□ -0.13
TRAF3-203ENST00000392745 BRD3OSQ6XYD6 125 aa14.22□□□□□ -0.13
TRAF3-203ENST00000392745 IFI27L1Q96BM0 104 aa14.22□□□□□ -0.13
TRAF3-203ENST00000392745 DKK2Q9UBU2 259 aa14.22□□□□□ -0.13
TRAF3-203ENST00000392745 NPYP01303 97 aa14.22□□□□□ -0.13
TRAF3-203ENST00000392745 LYPD1Q8N2G4 141 aa14.22□□□□□ -0.13
TRAF3-203ENST00000392745 RNF125Q96EQ8 232 aa14.22□□□□□ -0.13
TRAF3-203ENST00000392745 FANCD2OSQ96PS1 177 aa14.22□□□□□ -0.13
TRAF3-203ENST00000392745 TRAV40A0A0B4J280 105 aa14.21□□□□□ -0.13
TRAF3-203ENST00000392745 IGHV1-69DA0A0B4J2H0 117 aa14.21□□□□□ -0.13
TRAF3-203ENST00000392745 IGHV1-69P01742 117 aa14.21□□□□□ -0.13
TRAF3-203ENST00000392745 KRTAP10-9P60411 292 aa14.21□□□□□ -0.13
TRAF3-203ENST00000392745 PTPN13Q12923 2485 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 TMEM238C9JI98 176 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 MSMBP08118 114 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 TTC9CQ8N5M4 171 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 OR4X2Q8NGF9 303 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 USP9YO00507 2555 aaPredicted RBP14.2□□□□□ -0.14
TRAF3-203ENST00000392745 A0A1W2PPM0 123 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 NPIPB5A8MRT5 1133 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 SIVA1O15304 175 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 IGHV4-38-2P0DP08 117 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 NEGR1Q7Z3B1 354 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 SPCS1Q9Y6A9 102 aa14.2□□□□□ -0.14
TRAF3-203ENST00000392745 CKS2P33552 79 aa14.19□□□□□ -0.14
TRAF3-203ENST00000392745 C18orf15Q96N68 181 aa14.19□□□□□ -0.14
TRAF3-203ENST00000392745 IGLV11-55A0A075B6I3 123 aa14.19□□□□□ -0.14
TRAF3-203ENST00000392745 IGKV2-40A0A087WW87 121 aaPredicted RBP14.19□□□□□ -0.14
TRAF3-203ENST00000392745 IGKV2D-40P01614 121 aaPredicted RBP14.19□□□□□ -0.14
TRAF3-203ENST00000392745 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.19□□□□□ -0.148e-8■■■■■ 31.6
TRAF3-203ENST00000392745 DSCR9P59020 149 aa14.18□□□□□ -0.14
TRAF3-203ENST00000392745 PIFOQ8TCI5 191 aa14.18□□□□□ -0.14
TRAF3-203ENST00000392745 TTTY13Q9BZ97 58 aa14.18□□□□□ -0.14
TRAF3-203ENST00000392745 CHD6Q8TD26 2715 aa14.18□□□□□ -0.14
TRAF3-203ENST00000392745 TWIST1Q15672 202 aa14.18□□□□□ -0.14
TRAF3-203ENST00000392745 AAMDCQ9H7C9 122 aa14.18□□□□□ -0.14
TRAF3-203ENST00000392745 WI2-2373I1.2A0A1W2PRP0 233 aa14.17□□□□□ -0.14
TRAF3-203ENST00000392745 LINC01548A6NM66 108 aa14.17□□□□□ -0.14
TRAF3-203ENST00000392745 GAS8-AS1O95177 125 aa14.17□□□□□ -0.14
TRAF3-203ENST00000392745 AVPP01185 164 aa14.17□□□□□ -0.14
TRAF3-203ENST00000392745 TMEM219Q86XT9 240 aa14.17□□□□□ -0.14
TRAF3-203ENST00000392745 NPFFR1Q9GZQ6 430 aa14.17□□□□□ -0.14
TRAF3-203ENST00000392745 HIF1ANQ9NWT6 349 aa14.17□□□□□ -0.14
TRAF3-203ENST00000392745 NBPF19A0A087WUL8 3843 aa14.16□□□□□ -0.14
TRAF3-203ENST00000392745 IGKV2D-26A0A0A0MRZ7 120 aa14.16□□□□□ -0.14
TRAF3-203ENST00000392745 Q8TAT8 98 aa14.16□□□□□ -0.14
TRAF3-203ENST00000392745 MSRB1Q9NZV6 116 aa14.16□□□□□ -0.14
TRAF3-203ENST00000392745 ABCA12Q86UK0 2595 aa14.16□□□□□ -0.14
TRAF3-203ENST00000392745 B4DSR2 109 aa14.16□□□□□ -0.14
TRAF3-203ENST00000392745 ZNF80P51504 273 aaPredicted RBP14.16□□□□□ -0.14
TRAF3-203ENST00000392745 CSPG4Q6UVK1 2322 aa14.15□□□□□ -0.14
TRAF3-203ENST00000392745 A0A096LNT2 108 aa14.15□□□□□ -0.14
TRAF3-203ENST00000392745 F8W735 103 aaPredicted RBP14.15□□□□□ -0.14
TRAF3-203ENST00000392745 ATP6V0E1O15342 81 aa14.15□□□□□ -0.14
TRAF3-203ENST00000392745 SLC25A16P16260 332 aa14.15□□□□□ -0.14
TRAF3-203ENST00000392745 FXYD2P54710 66 aa14.15□□□□□ -0.14
TRAF3-203ENST00000392745 IGFL4Q6B9Z1 124 aa14.15□□□□□ -0.14
TRAF3-203ENST00000392745 ZNF575Q86XF7 245 aa14.15□□□□□ -0.14
TRAF3-203ENST00000392745 OR5A1Q8NGJ0 315 aa14.15□□□□□ -0.14
TRAF3-203ENST00000392745 TMEM190Q8WZ59 177 aa14.15□□□□□ -0.14
TRAF3-203ENST00000392745 ZANQ9Y493 2812 aa14.14□□□□□ -0.15
TRAF3-203ENST00000392745 GCSHP23434 173 aa14.14□□□□□ -0.15
TRAF3-203ENST00000392745 C5orf56Q8N8D9 126 aa14.14□□□□□ -0.15
TRAF3-203ENST00000392745 PRR25Q96S07 402 aa14.14□□□□□ -0.15
TRAF3-203ENST00000392745 FABP2P12104 132 aa14.14□□□□□ -0.15
TRAF3-203ENST00000392745 PDE6HQ13956 83 aa14.14□□□□□ -0.15
TRAF3-203ENST00000392745 SAMD5Q5TGI4 173 aa14.14□□□□□ -0.15
TRAF3-203ENST00000392745 MAPK1IP1LQ8NDC0 245 aa14.14□□□□□ -0.15
TRAF3-203ENST00000392745 GNG7O60262 68 aa14.13□□□□□ -0.15
TRAF3-203ENST00000392745 IGHV3-23P01764 117 aa14.13□□□□□ -0.15
TRAF3-203ENST00000392745 K7ERJ3 54 aa14.13□□□□□ -0.15
TRAF3-203ENST00000392745 SMIM13P0DJ93 91 aa14.13□□□□□ -0.15
TRAF3-203ENST00000392745 ECSCRQ19T08 205 aa14.13□□□□□ -0.15
TRAF3-203ENST00000392745 RNF185Q96GF1 192 aa14.13□□□□□ -0.15
TRAF3-203ENST00000392745 VGLL1Q99990 258 aa14.13□□□□□ -0.15
TRAF3-203ENST00000392745 TENM4Q6N022 2769 aa14.12□□□□□ -0.15
TRAF3-203ENST00000392745 G3V318 75 aa14.12□□□□□ -0.15
TRAF3-203ENST00000392745 MFAP4P55083 255 aa14.12□□□□□ -0.15
TRAF3-203ENST00000392745 HHLA3Q9XRX5 114 aa14.12□□□□□ -0.15
TRAF3-203ENST00000392745 KMT2BQ9UMN6 2715 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-203ENST00000392745 IGLC6P0CF74 106 aa14.12□□□□□ -0.15
TRAF3-203ENST00000392745 LEPP41159 167 aa14.12□□□□□ -0.15
TRAF3-203ENST00000392745 ODF1Q14990 250 aa14.12□□□□□ -0.15
TRAF3-203ENST00000392745 EVI2AP22794 236 aa14.11□□□□□ -0.15
TRAF3-203ENST00000392745 HLA-DMBP28068 263 aa14.11□□□□□ -0.15
TRAF3-203ENST00000392745 C21orf62Q9NYP8 219 aa14.11□□□□□ -0.15
TRAF3-203ENST00000392745 DOPEY2Q9Y3R5 2298 aa14.11□□□□□ -0.15
TRAF3-203ENST00000392745 K7EMI3 77 aa14.1□□□□□ -0.15
TRAF3-203ENST00000392745 FAM110DQ8TAY7 271 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-203ENST00000392745 MAP1LC3AQ9H492 121 aa14.1□□□□□ -0.15
TRAF3-203ENST00000392745 COX8CQ7Z4L0 72 aa14.1□□□□□ -0.15
TRAF3-203ENST00000392745 ZNF48Q96MX3 618 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-203ENST00000392745 APCP25054 2843 aa14.1□□□□□ -0.15
TRAF3-203ENST00000392745 GATA1P15976 413 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-203ENST00000392745 RPL24P83731 157 aaKnown RBP14.09□□□□□ -0.15
TRAF3-203ENST00000392745 LINC01356Q8N9X3 169 aa14.09□□□□□ -0.15
TRAF3-203ENST00000392745 CHAC1Q9BUX1 264 aa14.09□□□□□ -0.15
TRAF3-203ENST00000392745 ZMAT4Q9H898 229 aa14.09□□□□□ -0.15
TRAF3-203ENST00000392745 MOB4Q9Y3A3 225 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms