RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 LINC01619G3V211 115 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 K7EIM0 57 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 TRGV3P03979 118 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 GLRXP35754 106 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 ASCL5Q7RTU5 278 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 MYOZ3Q8TDC0 251 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 CNFNQ9BYD5 112 aa12.16□□□□□ -0.46
CSNK1A1-202ENST00000377843 ORM1P02763 201 aa12.15□□□□□ -0.46
CSNK1A1-202ENST00000377843 HLA-DMBP28068 263 aa12.15□□□□□ -0.46
CSNK1A1-202ENST00000377843 UBE2D3P61077 147 aa12.15□□□□□ -0.46
CSNK1A1-202ENST00000377843 UBE2D2P62837 147 aa12.15□□□□□ -0.46
CSNK1A1-202ENST00000377843 CITED1Q99966 193 aa12.15□□□□□ -0.46
CSNK1A1-202ENST00000377843 SPTBN4Q9H254 2564 aa12.15□□□□□ -0.46
CSNK1A1-202ENST00000377843 PLCE1Q9P212 2302 aa12.15□□□□□ -0.46
CSNK1A1-202ENST00000377843 TGFAP01135 160 aa12.15□□□□□ -0.47
CSNK1A1-202ENST00000377843 LINC01559Q495D7 138 aa12.15□□□□□ -0.47
CSNK1A1-202ENST00000377843 PLEKHB2Q96CS7 222 aa12.15□□□□□ -0.47
CSNK1A1-202ENST00000377843 AAMDCQ9H7C9 122 aa12.15□□□□□ -0.47
CSNK1A1-202ENST00000377843 APC2O95996 2303 aa12.15□□□□□ -0.47
CSNK1A1-202ENST00000377843 CSMD1Q96PZ7 3565 aa12.14□□□□□ -0.47
CSNK1A1-202ENST00000377843 TCL1BO95988 128 aa12.14□□□□□ -0.47
CSNK1A1-202ENST00000377843 UBE2D1P51668 147 aa12.14□□□□□ -0.47
CSNK1A1-202ENST00000377843 CCL8P80075 99 aa12.14□□□□□ -0.47
CSNK1A1-202ENST00000377843 ZFAND6Q6FIF0 208 aa12.14□□□□□ -0.47
CSNK1A1-202ENST00000377843 LINC00311Q8N616 119 aa12.14□□□□□ -0.47
CSNK1A1-202ENST00000377843 AJUBAQ96IF1 538 aa12.14□□□□□ -0.47
CSNK1A1-202ENST00000377843 CD40P25942 277 aa12.14□□□□□ -0.47
CSNK1A1-202ENST00000377843 PLNP26678 52 aa12.14□□□□□ -0.47
CSNK1A1-202ENST00000377843 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 RELNP78509 3460 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 ZNF688P0C7X2 276 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 LAGE3Q14657 143 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 NRACQ8N912 160 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 FBXL15Q9H469 300 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 TRBV7-9A0A0J9YWB2 115 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 IGHG4P01861 327 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 HERV-K104P63124 156 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 TMEM78Q5T7P6 136 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 LYPD2Q6UXB3 125 aa12.13□□□□□ -0.47
CSNK1A1-202ENST00000377843 ANKRD29Q8N6D5 301 aa12.12□□□□□ -0.47
CSNK1A1-202ENST00000377843 TEX29Q8N6K0 151 aa12.12□□□□□ -0.47
CSNK1A1-202ENST00000377843 F8VRH5 84 aa12.12□□□□□ -0.47
CSNK1A1-202ENST00000377843 CCDC179H3BU77 68 aa12.12□□□□□ -0.47
CSNK1A1-202ENST00000377843 C22orf34Q6ZV56 151 aa12.12□□□□□ -0.47
CSNK1A1-202ENST00000377843 PPP1R27Q86WC6 154 aa12.12□□□□□ -0.47
CSNK1A1-202ENST00000377843 ACACAQ13085 2346 aa12.11□□□□□ -0.47
CSNK1A1-202ENST00000377843 IGHG3P01860 377 aa12.11□□□□□ -0.47
CSNK1A1-202ENST00000377843 CD7P09564 240 aa12.11□□□□□ -0.47
CSNK1A1-202ENST00000377843 PDE6HQ13956 83 aa12.11□□□□□ -0.47
CSNK1A1-202ENST00000377843 PLGLAQ15195 96 aa12.11□□□□□ -0.47
CSNK1A1-202ENST00000377843 SBSPONQ8IVN8 264 aa12.11□□□□□ -0.47
CSNK1A1-202ENST00000377843 DLX6P56179 175 aa12.11□□□□□ -0.47
CSNK1A1-202ENST00000377843 TMEM190Q8WZ59 177 aa12.11□□□□□ -0.47
CSNK1A1-202ENST00000377843 TRBV20-1A0A075B6N2 111 aa12.1□□□□□ -0.47
CSNK1A1-202ENST00000377843 H3BVH4 76 aa12.1□□□□□ -0.47
CSNK1A1-202ENST00000377843 H7C1H1 209 aa12.1□□□□□ -0.47
CSNK1A1-202ENST00000377843 ERCC8Q13216 396 aa12.1□□□□□ -0.47
CSNK1A1-202ENST00000377843 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
CSNK1A1-202ENST00000377843 KLK15Q9H2R5 256 aa12.1□□□□□ -0.47
CSNK1A1-202ENST00000377843 CRLF1O75462 422 aa12.1□□□□□ -0.47
CSNK1A1-202ENST00000377843 FDCSPQ8NFU4 85 aa12.1□□□□□ -0.47
CSNK1A1-202ENST00000377843 SRD5A1P18405 259 aa12.09□□□□□ -0.47
CSNK1A1-202ENST00000377843 SEM1Q6ZVN7 128 aa12.09□□□□□ -0.47
CSNK1A1-202ENST00000377843 C8orf31Q8N9H6 132 aa12.09□□□□□ -0.47
CSNK1A1-202ENST00000377843 CFHR4Q92496 578 aa12.09□□□□□ -0.47
CSNK1A1-202ENST00000377843 RAXQ9Y2V3 346 aa12.09□□□□□ -0.47
CSNK1A1-202ENST00000377843 NBL1P41271 181 aa12.09□□□□□ -0.47
CSNK1A1-202ENST00000377843 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
CSNK1A1-202ENST00000377843 TRAV4A0A0B4J268 109 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 RHODO00212 210 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 DEFB109BQ30KR1 87 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 ZNF474Q6S9Z5 364 aaPredicted RBP12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 SMIM20Q8N5G0 67 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 FAM110AQ9BQ89 295 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 SMAD5-AS1Q9Y6J3 95 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 IGF2RP11717 2491 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 A8MWV9 139 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 LOXP28300 417 aaPredicted RBP12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 NDUFA11Q86Y39 141 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 VKORC1Q9BQB6 163 aa12.08□□□□□ -0.48
CSNK1A1-202ENST00000377843 TRAV12-1A0A0B4J245 112 aa12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 IGKV3D-20A0A0C4DH25 116 aa12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 PRAC2D3DTV9 90 aa12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 COX6B1P14854 86 aa12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 SLC25A16P16260 332 aa12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 NDUFV3P56181 108 aaKnown RBP12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 GFRALQ6UXV0 394 aa12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 DYNAPQ8N1N2 210 aa12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 BRI3O95415 125 aa12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 IGHV1-8P0DP01 117 aa12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 RPL32P62910 135 aaKnown RBP12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 SRSF9Q13242 221 aaKnown RBP eCLIP12.07□□□□□ -0.48
CSNK1A1-202ENST00000377843 FABP5P3A8MUU1 101 aa12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 PRTN3P24158 256 aa12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 SRSF2Q01130 221 aaKnown RBP12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 ZNF672Q499Z4 452 aaPredicted RBP12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 SCGB1D4Q6XE38 83 aa12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 Q6ZQT7 251 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms