RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 M0R1W7 72 aa10.75□□□□□ -0.69
SF1-205ENST00000377394 PRTN3P24158 256 aa10.75□□□□□ -0.69
SF1-205ENST00000377394 C12orf74Q32Q52 190 aa10.75□□□□□ -0.69
SF1-205ENST00000377394 TTC9CQ8N5M4 171 aa10.75□□□□□ -0.69
SF1-205ENST00000377394 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
SF1-205ENST00000377394 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
SF1-205ENST00000377394 ODF1Q14990 250 aa10.75□□□□□ -0.69
SF1-205ENST00000377394 CDSNQ15517 529 aa10.75□□□□□ -0.69
SF1-205ENST00000377394 ABCA4P78363 2273 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 CT45A10P0DMU9 189 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 FCER1GP30273 86 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 DYNAPQ8N1N2 210 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 U3KQK5 164 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 SH2D1AO60880 128 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 APOMO95445 188 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 COX8CQ7Z4L0 72 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 C21orf62Q9NYP8 219 aa10.74□□□□□ -0.69
SF1-205ENST00000377394 CEP295Q9C0D2 2601 aa10.73□□□□□ -0.69
SF1-205ENST00000377394 FOXC1Q12948 553 aa10.73□□□□□ -0.69
SF1-205ENST00000377394 ZC2HC1BQ5TFG8 222 aa10.73□□□□□ -0.69
SF1-205ENST00000377394 Q8N6K4 173 aa10.73□□□□□ -0.69
SF1-205ENST00000377394 ZNF418Q8TF45 676 aaPredicted RBP10.73□□□□□ -0.69
SF1-205ENST00000377394 IGKV2-40A0A087WW87 121 aaPredicted RBP10.73□□□□□ -0.69
SF1-205ENST00000377394 IGKV2D-40P01614 121 aaPredicted RBP10.73□□□□□ -0.69
SF1-205ENST00000377394 PRSS1P07477 247 aa10.73□□□□□ -0.69
SF1-205ENST00000377394 CKS2P33552 79 aa10.73□□□□□ -0.69
SF1-205ENST00000377394 TIMD4Q96H15 378 aa10.73□□□□□ -0.69
SF1-205ENST00000377394 IGHV3-23P01764 117 aa10.72□□□□□ -0.69
SF1-205ENST00000377394 XGP55808 180 aa10.72□□□□□ -0.69
SF1-205ENST00000377394 MUC6Q6W4X9 2439 aa10.72□□□□□ -0.69
SF1-205ENST00000377394 TSPAN13O95857 204 aa10.72□□□□□ -0.69
SF1-205ENST00000377394 NFE4Q86UQ8 179 aa10.72□□□□□ -0.69
SF1-205ENST00000377394 ZNF502Q8TBZ5 544 aa10.72□□□□□ -0.69
SF1-205ENST00000377394 NCBP2LA6PVI3 153 aaKnown RBP10.71□□□□□ -0.69
SF1-205ENST00000377394 LEPP41159 167 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 FOXI1Q12951 378 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 C11orf71Q6IPW1 123 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 SFTA2Q6UW10 78 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 FOXC2Q99958 501 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 SMAD5-AS1Q9Y6J3 95 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 PTPRQQ9UMZ3 2332 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 CCL21O00585 134 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 IGHG4P01861 327 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 CTSGP08311 255 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 EGR2P11161 476 aaPredicted RBP10.71□□□□□ -0.69
SF1-205ENST00000377394 RPL7P18124 248 aaKnown RBP10.71□□□□□ -0.69
SF1-205ENST00000377394 VMO1Q7Z5L0 202 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 ZNF575Q86XF7 245 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 PRR25Q96S07 402 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 ZMAT4Q9H898 229 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 TMEM160Q9NX00 188 aa10.71□□□□□ -0.69
SF1-205ENST00000377394 LINC01548A6NM66 108 aa10.71□□□□□ -0.7
SF1-205ENST00000377394 IGKCP01834 107 aa10.71□□□□□ -0.7
SF1-205ENST00000377394 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.7
SF1-205ENST00000377394 RRN3P1Q2M238 152 aa10.71□□□□□ -0.7
SF1-205ENST00000377394 TMEM8BA6NDV4 472 aa10.7□□□□□ -0.7
SF1-205ENST00000377394 EBI3Q14213 229 aa10.7□□□□□ -0.7
SF1-205ENST00000377394 PTH2Q96A98 100 aa10.7□□□□□ -0.7
SF1-205ENST00000377394 EVI2AP22794 236 aa10.7□□□□□ -0.7
SF1-205ENST00000377394 ZNF80P51504 273 aaPredicted RBP10.7□□□□□ -0.7
SF1-205ENST00000377394 ADORA2A-AS1P86434 159 aa10.7□□□□□ -0.7
SF1-205ENST00000377394 HRNRQ86YZ3 2850 aaPredicted RBP10.7□□□□□ -0.7
SF1-205ENST00000377394 TRAV40A0A0B4J280 105 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 C1orf122Q6ZSJ8 110 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 PIFOQ8TCI5 191 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 PSMG3-AS1Q96PY0 264 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 HIST1H4GQ99525 98 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 CYSLTR1Q9Y271 337 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 PTPRZ1P23471 2315 aaPredicted RBP10.69□□□□□ -0.7
SF1-205ENST00000377394 IGFL4Q6B9Z1 124 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 Q6ZUT4 128 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 Q8TAT8 98 aa10.69□□□□□ -0.7
SF1-205ENST00000377394 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
SF1-205ENST00000377394 GATA1P15976 413 aaPredicted RBP10.68□□□□□ -0.7
SF1-205ENST00000377394 HLA-DMBP28068 263 aa10.68□□□□□ -0.7
SF1-205ENST00000377394 TWIST1Q15672 202 aa10.68□□□□□ -0.7
SF1-205ENST00000377394 CFAP161Q6P656 301 aa10.68□□□□□ -0.7
SF1-205ENST00000377394 OOSP1A8MZH6 123 aa10.68□□□□□ -0.7
SF1-205ENST00000377394 ZFP36P26651 326 aaKnown RBP10.68□□□□□ -0.7
SF1-205ENST00000377394 C1QTNF4Q9BXJ3 329 aa10.68□□□□□ -0.7
SF1-205ENST00000377394 IGLC6P0CF74 106 aa10.67□□□□□ -0.7
SF1-205ENST00000377394 MSRB2Q9Y3D2 182 aa10.67□□□□□ -0.7
SF1-205ENST00000377394 MINOS1Q5TGZ0 78 aa10.67□□□□□ -0.7
SF1-205ENST00000377394 MRPL35Q9NZE8 188 aaKnown RBP10.67□□□□□ -0.7
SF1-205ENST00000377394 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
SF1-205ENST00000377394 MINOS1-NBL1R4GNA1 71 aa10.67□□□□□ -0.7
SF1-205ENST00000377394 SVEP1Q4LDE5 3571 aa10.67□□□□□ -0.7
SF1-205ENST00000377394 DPM2O94777 84 aa10.67□□□□□ -0.7
SF1-205ENST00000377394 MORN3Q6PF18 240 aaPredicted RBP10.67□□□□□ -0.7
SF1-205ENST00000377394 IGHV3OR16-8A0A075B7F1 116 aa10.66□□□□□ -0.7
SF1-205ENST00000377394 Q8N9W7 124 aa10.66□□□□□ -0.7
SF1-205ENST00000377394 TMEM158Q8WZ71 300 aa10.66□□□□□ -0.7
SF1-205ENST00000377394 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
SF1-205ENST00000377394 SPTA1P02549 2419 aa10.66□□□□□ -0.7
SF1-205ENST00000377394 IGHV3-35A0A0C4DH35 117 aa10.65□□□□□ -0.7
SF1-205ENST00000377394 SRSF1Q07955 248 aaKnown RBP eCLIP10.65□□□□□ -0.74e-12■□□□□ 10.5
SF1-205ENST00000377394 CFAP126Q5VTH2 177 aa10.65□□□□□ -0.7
SF1-205ENST00000377394 PRSS29PA6NIE9 313 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms