RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 IGKV2D-26A0A0A0MRZ7 120 aa14.58□□□□□ -0.07
PSPC1-201ENST00000338910 GOSR1O95249 250 aa14.58□□□□□ -0.07
PSPC1-201ENST00000338910 CELSR1Q9NYQ6 3014 aa14.58□□□□□ -0.08
PSPC1-201ENST00000338910 SMKR1H3BMG3 65 aa14.58□□□□□ -0.08
PSPC1-201ENST00000338910 MRPS12O15235 138 aaKnown RBP14.58□□□□□ -0.08
PSPC1-201ENST00000338910 AZU1P20160 251 aa14.58□□□□□ -0.08
PSPC1-201ENST00000338910 WFDC3Q8IUB2 231 aa14.58□□□□□ -0.08
PSPC1-201ENST00000338910 ZNF843Q8N446 348 aa14.58□□□□□ -0.08
PSPC1-201ENST00000338910 ZMAT4Q9H898 229 aa14.58□□□□□ -0.08
PSPC1-201ENST00000338910 HHLA3Q9XRX5 114 aa14.58□□□□□ -0.08
PSPC1-201ENST00000338910 S4R3C0 116 aa14.58□□□□□ -0.08
PSPC1-201ENST00000338910 CKS2P33552 79 aa14.57□□□□□ -0.08
PSPC1-201ENST00000338910 MINOS1Q5TGZ0 78 aa14.57□□□□□ -0.08
PSPC1-201ENST00000338910 SRSF8Q9BRL6 282 aaKnown RBP14.57□□□□□ -0.08
PSPC1-201ENST00000338910 MINOS1-NBL1R4GNA1 71 aa14.57□□□□□ -0.08
PSPC1-201ENST00000338910 K7EIM0 57 aa14.57□□□□□ -0.08
PSPC1-201ENST00000338910 PSMG4Q5JS54 123 aa14.57□□□□□ -0.08
PSPC1-201ENST00000338910 CHAC1Q9BUX1 264 aa14.57□□□□□ -0.08
PSPC1-201ENST00000338910 K7ERJ3 54 aa14.56□□□□□ -0.08
PSPC1-201ENST00000338910 SH2D1AO60880 128 aa14.56□□□□□ -0.08
PSPC1-201ENST00000338910 ODF1Q14990 250 aa14.56□□□□□ -0.08
PSPC1-201ENST00000338910 TTTY13Q9BZ97 58 aa14.56□□□□□ -0.08
PSPC1-201ENST00000338910 GTSF1LQ9H1H1 148 aa14.56□□□□□ -0.08
PSPC1-201ENST00000338910 ZFHX3Q15911 3703 aa14.56□□□□□ -0.08
PSPC1-201ENST00000338910 ZNF562Q6V9R5 426 aa14.56□□□□□ -0.08
PSPC1-201ENST00000338910 FBLL1A6NHQ2 334 aaKnown RBP14.55□□□□□ -0.08
PSPC1-201ENST00000338910 OOSP1A8MZH6 123 aa14.55□□□□□ -0.08
PSPC1-201ENST00000338910 SIGMAR1Q99720 223 aa14.55□□□□□ -0.08
PSPC1-201ENST00000338910 ABCA2Q9BZC7 2435 aa14.55□□□□□ -0.08
PSPC1-201ENST00000338910 NDPQ00604 133 aa14.55□□□□□ -0.08
PSPC1-201ENST00000338910 ARPC1AQ92747 370 aa14.55□□□□□ -0.08
PSPC1-201ENST00000338910 LINC01546A6NGU7 62 aa14.54□□□□□ -0.08
PSPC1-201ENST00000338910 UBE2E1P51965 193 aa14.54□□□□□ -0.08
PSPC1-201ENST00000338910 Q8N6K4 173 aa14.54□□□□□ -0.08
PSPC1-201ENST00000338910 SMPXQ9UHP9 88 aa14.54□□□□□ -0.08
PSPC1-201ENST00000338910 ZNF491Q8N8L2 437 aa14.54□□□□□ -0.08
PSPC1-201ENST00000338910 TM2D2Q9BX73 214 aa14.54□□□□□ -0.08
PSPC1-201ENST00000338910 TRBV25-1A0A075B6N4 114 aa14.53□□□□□ -0.08
PSPC1-201ENST00000338910 SAA4P35542 130 aa14.53□□□□□ -0.08
PSPC1-201ENST00000338910 SMAGPQ0VAQ4 97 aa14.53□□□□□ -0.08
PSPC1-201ENST00000338910 FOXI2Q6ZQN5 318 aa14.53□□□□□ -0.08
PSPC1-201ENST00000338910 COX8CQ7Z4L0 72 aa14.53□□□□□ -0.08
PSPC1-201ENST00000338910 AJUBAQ96IF1 538 aa14.53□□□□□ -0.08
PSPC1-201ENST00000338910 POLQO75417 2590 aa14.53□□□□□ -0.08
PSPC1-201ENST00000338910 EBI3Q14213 229 aa14.53□□□□□ -0.08
PSPC1-201ENST00000338910 CD300EQ496F6 205 aaPredicted RBP14.53□□□□□ -0.08
PSPC1-201ENST00000338910 RNF125Q96EQ8 232 aa14.53□□□□□ -0.08
PSPC1-201ENST00000338910 SPANXB1Q9NS25 103 aaPredicted RBP14.53□□□□□ -0.08
PSPC1-201ENST00000338910 E9PLD3 99 aa14.52□□□□□ -0.08
PSPC1-201ENST00000338910 TWIST1Q15672 202 aa14.52□□□□□ -0.08
PSPC1-201ENST00000338910 NHP2Q9NX24 153 aaKnown RBP14.52□□□□□ -0.08
PSPC1-201ENST00000338910 TSSC4Q9Y5U2 329 aaPredicted RBP14.52□□□□□ -0.08
PSPC1-201ENST00000338910 ATP5J2P56134 94 aa14.52□□□□□ -0.09
PSPC1-201ENST00000338910 SRSF1Q07955 248 aaKnown RBP eCLIP14.52□□□□□ -0.09
PSPC1-201ENST00000338910 PDE6HQ13956 83 aa14.52□□□□□ -0.09
PSPC1-201ENST00000338910 CEND1Q8N111 149 aa14.52□□□□□ -0.09
PSPC1-201ENST00000338910 NRGNQ92686 78 aa14.52□□□□□ -0.09
PSPC1-201ENST00000338910 FANCD2OSQ96PS1 177 aa14.52□□□□□ -0.09
PSPC1-201ENST00000338910 GAGE12HA6NDE8 117 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 F8W1H4 67 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 IL4P05112 153 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 EGR2P11161 476 aaPredicted RBP14.51□□□□□ -0.09
PSPC1-201ENST00000338910 EVI2AP22794 236 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 FCER1GP30273 86 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 RNF185Q96GF1 192 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 MAP1LC3AQ9H492 121 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 AAMDCQ9H7C9 122 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 FBN2P35556 2912 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 IGHV4-61A0A0C4DH41 118 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 IGLC6P0CF74 106 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 LEPP41159 167 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 WFDC2Q14508 124 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 PIMREGQ9BSJ6 248 aa14.51□□□□□ -0.09
PSPC1-201ENST00000338910 IGKCP01834 107 aa14.5□□□□□ -0.09
PSPC1-201ENST00000338910 ZNF575Q86XF7 245 aa14.5□□□□□ -0.09
PSPC1-201ENST00000338910 IGLV11-55A0A075B6I3 123 aa14.5□□□□□ -0.09
PSPC1-201ENST00000338910 IGHV3OR16-10A0A075B7F0 116 aa14.5□□□□□ -0.09
PSPC1-201ENST00000338910 IGHV7-81A0A0B4J1V7 117 aa14.5□□□□□ -0.09
PSPC1-201ENST00000338910 NPIPB5A8MRT5 1133 aa14.5□□□□□ -0.09
PSPC1-201ENST00000338910 Q8N9W7 124 aa14.5□□□□□ -0.09
PSPC1-201ENST00000338910 C10orf105Q8TEF2 133 aa14.5□□□□□ -0.09
PSPC1-201ENST00000338910 IGLL5B9A064 214 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 GAS8-AS1O95177 125 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 IGHV3-23P01764 117 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 TTC9CQ8N5M4 171 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 PRR25Q96S07 402 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 PRSS1P07477 247 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 HLA-DRB4P13762 266 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 GTSCR1Q86UQ5 136 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 SPATA25Q9BR10 227 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 HLA-DRB4X5D2U9 266 aa14.49□□□□□ -0.09
PSPC1-201ENST00000338910 IGKV2-40A0A087WW87 121 aaPredicted RBP14.48□□□□□ -0.09
PSPC1-201ENST00000338910 CENPVL3A0A0U1RRI6 287 aa14.48□□□□□ -0.09
PSPC1-201ENST00000338910 NPFFO15130 113 aa14.48□□□□□ -0.09
PSPC1-201ENST00000338910 IGKV2D-40P01614 121 aaPredicted RBP14.48□□□□□ -0.09
PSPC1-201ENST00000338910 MSRB1Q9NZV6 116 aa14.48□□□□□ -0.09
PSPC1-201ENST00000338910 CHD6Q8TD26 2715 aa14.47□□□□□ -0.09
PSPC1-201ENST00000338910 J3QR89 54 aa14.47□□□□□ -0.09
PSPC1-201ENST00000338910 ZNF80P51504 273 aaPredicted RBP14.47□□□□□ -0.09
PSPC1-201ENST00000338910 ZC2HC1BQ5TFG8 222 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms