RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SH2D6Q7Z4S9 175 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 TRBV7-3A0A075B6L6 115 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 TRGV5A0A0B4J1U4 118 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 COX17Q14061 63 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 STPG1Q5TH74 334 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 Q6ZWC4 215 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 IL17CQ9P0M4 197 aa4.91□□□□□ -1.62
CDC42BPA-201ENST00000334218 ZNF625Q96I27 306 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 C20orf78Q9BR46 151 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 K7ERJ3 54 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 C1orf100Q5SVJ3 147 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 MT-ATP8P03928 68 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 C5orf24Q7Z6I8 188 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 RNASE7Q9H1E1 156 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 PTPRSQ13332 1948 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 SRRM4A7MD48 611 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 CCL22O00626 93 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 NTF4P34130 210 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 PRSS57Q6UWY2 283 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 GVQW1Q8N7I0 195 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 Q8N8P6 123 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 C1QTNF5Q9BXJ0 243 aa4.9□□□□□ -1.62
CDC42BPA-201ENST00000334218 WFDC2Q14508 124 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 PRR4Q16378 134 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 NBR2O15453 112 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 APOC4P55056 127 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 FGFRL1Q8N441 504 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 LMO3Q8TAP4 145 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 WNT2BQ93097 391 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 A8MZ25 164 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 CRYGDP07320 174 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 CYP4F30PQ9H0H9 118 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 NPPCP23582 126 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 DYNAPQ8N1N2 210 aa4.9□□□□□ -1.63
CDC42BPA-201ENST00000334218 J3QQQ9 107 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 HGFACQ04756 655 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 METRNLQ641Q3 311 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 MRPL35Q9NZE8 188 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 DKK4Q9UBT3 224 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 A0A1W2PQD3 144 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 PFN1P07737 140 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 RPS27LQ71UM5 84 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 OCC1Q8TAD7 63 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 RBAKDNA6NC62 111 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 SHISA8B8ZZ34 492 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 EIF4EBP1Q13541 118 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 CNEP1R1Q8N9A8 125 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 AVPP01185 164 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 LINC00477Q96M19 166 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 LTAP01374 205 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 HEXA-AS1Q9H8Q6 139 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 A0A087WWL8 130 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 MSMBP08118 114 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 ESRGQ1W209 222 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 SAA4P35542 130 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 KIR2DL5BQ8NHK3 375 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 SMIM2Q9BVW6 85 aa4.89□□□□□ -1.63
CDC42BPA-201ENST00000334218 PCSK5Q92824 1860 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 SMIM27A0A1W2PRY6 76 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 RPP25Q9BUL9 199 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 M0R1W7 72 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 Q5BKY6 102 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 IGKV1D-42A0A075B6H8 117 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 NDUFS7O75251 213 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 TMEM75Q8N9X5 138 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 ZC2HC1AQ96GY0 325 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 IGKV3D-7A0A0C4DH55 119 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 NTN3O00634 580 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 CCL3P10147 92 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 DEFB133Q30KQ1 61 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 TCRBV4S1A1TA0A5B7 111 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 LINC01565O15544 149 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 CGAP01215 116 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 FOXF1Q12946 379 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 XAGE1AQ9HD64 81 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 NRXN2Q9P2S2 1712 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 BPY2O14599 106 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 ERC2-IT1O76042 136 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 ZNF503Q96F45 646 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 ZNF706Q9Y5V0 76 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 LCA10Q71F78 164 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 GTSF1Q8WW33 167 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 DPH3Q96FX2 82 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 SCARF2Q96GP6 870 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 CCL28Q9NRJ3 127 aa4.88□□□□□ -1.63
CDC42BPA-201ENST00000334218 WFDC10AQ9H1F0 79 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 Q8N9L7 120 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 IGHV1OR15-1A0A075B7D0 117 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 TRBV5-5A0A0J9YX44 114 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 NNATQ16517 81 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 IGLV3-10A0A075B6K4 115 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 TRBV5-4A0A0C4DH59 114 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 IFI6P09912 130 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 DAZ2Q13117 558 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 DAZ4Q86SG3 579 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 DAZ3Q9NR90 486 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 MRPL36Q9P0J6 103 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms