RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 Q8NA96 180 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 CFHR4Q92496 578 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 IGKV3-7A0A075B6H7 116 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 PRAC2D3DTV9 90 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 IGLC6P0CF74 106 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 MINOS1Q5TGZ0 78 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 PIFOQ8TCI5 191 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 ZNF48Q96MX3 618 aaPredicted RBP6.78□□□□□ -1.32
LIMK2-201ENST00000331728 GTSF1LQ9H1H1 148 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 MINOS1-NBL1R4GNA1 71 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 ATRXP46100 2492 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 IGKV2D-26A0A0A0MRZ7 120 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 ODF1Q14990 250 aa6.78□□□□□ -1.32
LIMK2-201ENST00000331728 TRAV26-2A0A0B4J265 109 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 SCGB1A1P11684 91 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 AZU1P20160 251 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 ATP5G2Q06055 141 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 SRSF1Q07955 248 aaKnown RBP eCLIP6.77□□□□□ -1.331e-5■■■□□ 17.8
LIMK2-201ENST00000331728 SMAGPQ0VAQ4 97 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 ZNF479Q96JC4 524 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 SCGB3A1Q96QR1 104 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 MRPL35Q9NZE8 188 aaKnown RBP6.77□□□□□ -1.33
LIMK2-201ENST00000331728 PHLDA3Q9Y5J5 127 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 OR10J6PQ8NGY7 276 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 FAM110DQ8TAY7 271 aaPredicted RBP6.77□□□□□ -1.33
LIMK2-201ENST00000331728 TRBV25-1A0A075B6N4 114 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 ATP6V0E1O15342 81 aa6.77□□□□□ -1.33
LIMK2-201ENST00000331728 PTPRQQ9UMZ3 2332 aa6.76□□□□□ -1.33
LIMK2-201ENST00000331728 IGHV7-81A0A0B4J1V7 117 aa6.76□□□□□ -1.33
LIMK2-201ENST00000331728 SRSF9Q13242 221 aaKnown RBP eCLIP6.76□□□□□ -1.33
LIMK2-201ENST00000331728 CEND1Q8N111 149 aa6.76□□□□□ -1.33
LIMK2-201ENST00000331728 LY6G5BQ8NDX9 201 aa6.76□□□□□ -1.33
LIMK2-201ENST00000331728 SPOCK3Q9BQ16 436 aa6.76□□□□□ -1.33
LIMK2-201ENST00000331728 AGPAT4-IT1Q9H0P7 198 aa6.76□□□□□ -1.33
LIMK2-201ENST00000331728 UBTD1Q9HAC8 227 aa6.76□□□□□ -1.33
LIMK2-201ENST00000331728 TSSC4Q9Y5U2 329 aaPredicted RBP6.76□□□□□ -1.33
LIMK2-201ENST00000331728 COL6A3P12111 3177 aa6.76□□□□□ -1.33
LIMK2-201ENST00000331728 ZNF502Q8TBZ5 544 aa6.76□□□□□ -1.33
LIMK2-201ENST00000331728 TRGV3P03979 118 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 EFNA4P52798 201 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 CD300EQ496F6 205 aaPredicted RBP6.75□□□□□ -1.33
LIMK2-201ENST00000331728 ZMAT4Q9H898 229 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 HHLA3Q9XRX5 114 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 F8W1H4 67 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 G3V318 75 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 PLNP26678 52 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 RNF185Q96GF1 192 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 TM2D2Q9BX73 214 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 ASIPP42127 132 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 ORMDL2Q53FV1 153 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 C8orf86Q6ZUL3 223 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 RAXQ9Y2V3 346 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 SMAD5-AS1Q9Y6J3 95 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 CEP295Q9C0D2 2601 aa6.75□□□□□ -1.33
LIMK2-201ENST00000331728 A0A1B0GV72 72 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 IGLL5B9A064 214 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 E9PLD3 99 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 F5H697 171 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 BUB3O43684 328 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 GAS8-AS1O95177 125 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 LINC00527Q9UJ94 153 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 IGHV3OR16-10A0A075B7F0 116 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 ODF3BA8MYP8 253 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 WFDC2Q14508 124 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 FOXI2Q6ZQN5 318 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 COX8CQ7Z4L0 72 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 PHLDA1Q8WV24 401 aaPredicted RBP6.74□□□□□ -1.33
LIMK2-201ENST00000331728 MUC6Q6W4X9 2439 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 A6NJY4 79 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 H7C1H1 209 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 K7EMI3 77 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 HERVK_113P61574 105 aa6.74□□□□□ -1.33
LIMK2-201ENST00000331728 SRSF2Q01130 221 aaKnown RBP6.74□□□□□ -1.33
LIMK2-201ENST00000331728 SPANXB1Q9NS25 103 aaPredicted RBP6.74□□□□□ -1.33
LIMK2-201ENST00000331728 LOC107984156A0A0G2JMH3 177 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 F8W735 103 aaPredicted RBP6.73□□□□□ -1.33
LIMK2-201ENST00000331728 HLA-DRB4P13762 266 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 TAL2Q16559 108 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 ARL17AQ8IVW1 177 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 Q8N9W7 124 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 HLA-DRB4X5D2U9 266 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 DOPEY2Q9Y3R5 2298 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 TRAV21A0A0B4J279 112 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 LINC01546A6NGU7 62 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 SAA4P35542 130 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 C9orf139Q6ZV77 190 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 A0A087WX48 190 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 IGKV3D-20A0A0C4DH25 116 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 H3BMG7 143 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 C12orf74Q32Q52 190 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 ETDBQ3ZM63 59 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 TMEM219Q86XT9 240 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 MRPL16Q9NX20 251 aaKnown RBP6.73□□□□□ -1.33
LIMK2-201ENST00000331728 CYSLTR1Q9Y271 337 aa6.73□□□□□ -1.33
LIMK2-201ENST00000331728 TRBV7-1A0A0A6YYK4 115 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms