RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 RBMY1EA6NEQ0 496 aaKnown RBP10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 RBMY1DP0C7P1 496 aaKnown RBP10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 RBMY1A1P0DJD3 496 aaKnown RBP10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 RBMY1CP0DJD4 496 aa10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 DUX5Q96PT3 197 aa10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 DUX3Q96PT4 197 aa10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 SPXQ9BT56 116 aa10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 IGKV1OR2-108A0A075B7D4 117 aa10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 Q86TA4 180 aa10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 TMEM219Q86XT9 240 aa10.02□□□□□ -0.81
SLC6A1-201ENST00000287766 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 TCF15Q12870 199 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 RITA1Q96K30 269 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 MRPL35Q9NZE8 188 aaKnown RBP10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 E7EUB6 86 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 RHOGP84095 191 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 BOD1L2Q8IYS8 172 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 TRGV9Q99603 122 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 CTSZQ9UBR2 303 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 ZNF833PQ6ZTB9 187 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 C22orf34Q6ZV56 151 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 LINC00173Q6ZV60 143 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 K7EMI3 77 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 FAM104BQ5XKR9 115 aa10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 C1orf229Q6ZS94 237 aaPredicted RBP10.01□□□□□ -0.81
SLC6A1-201ENST00000287766 RS1O15537 224 aa10□□□□□ -0.81
SLC6A1-201ENST00000287766 WFDC2Q14508 124 aa10□□□□□ -0.81
SLC6A1-201ENST00000287766 GRNP28799 593 aaKnown RBP10□□□□□ -0.81
SLC6A1-201ENST00000287766 LINC00158P58513 81 aa10□□□□□ -0.81
SLC6A1-201ENST00000287766 PMVKQ15126 192 aa10□□□□□ -0.81
SLC6A1-201ENST00000287766 C1QTNF4Q9BXJ3 329 aa10□□□□□ -0.81
SLC6A1-201ENST00000287766 CHD8Q9HCK8 2581 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 FGF6P10767 208 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 SIGLEC8Q9NYZ4 499 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 ARHGAP32A7KAX9 2087 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 VPS13AQ96RL7 3174 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 IGHV3-73A0A0B4J1V6 119 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 H3BMM0 161 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 CPAMD8Q8IZJ3 1885 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 LGALS1P09382 135 aaKnown RBP9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 UCNP55089 124 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 LGALS9BQ3B8N2 356 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 LGALS9CQ6DKI2 356 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 LHBP01229 141 aa9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 NTN5Q8WTR8 489 aaPredicted RBP9.99□□□□□ -0.81
SLC6A1-201ENST00000287766 PAX1P15863 534 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 C15orf32Q32M92 178 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 PIP4P1Q86T03 277 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 C11orf52Q96A22 123 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 PLEKHB2Q96CS7 222 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 C17orf77Q96MU5 243 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 MYO9AB2RTY4 2548 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 PAX4O43316 350 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 ATP5J2P56134 94 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 NDPQ00604 133 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 C12orf74Q32Q52 190 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 C3orf56Q8N813 242 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 ITLN2Q8WWU7 325 aaPredicted RBP9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 FNDC10F2Z333 226 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 THBDP07204 575 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 LINC01587Q99440 93 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 MRPL36Q9P0J6 103 aaKnown RBP9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 CELSR3Q9NYQ7 3312 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 SPTBN4Q9H254 2564 aa9.98□□□□□ -0.81
SLC6A1-201ENST00000287766 SLC25A20O43772 301 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 MRPL51Q4U2R6 128 aaKnown RBP9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 PRADC1Q9BSG0 188 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 ZNF747Q9BV97 191 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 P0C879 139 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 EFNA4P52798 201 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 C5orf64Q2M2E5 130 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 TEX36Q5VZQ5 186 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 MORN3Q6PF18 240 aaPredicted RBP9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 C2orf66Q6UXQ4 117 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 VMO1Q7Z5L0 202 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 C15orf53Q8NAA6 179 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 FXYD5Q96DB9 178 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 GFRA4Q9GZZ7 299 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 TAX1BP3O14907 124 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 ZNF688P0C7X2 276 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 ANKRD39Q53RE8 183 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 CEND1Q8N111 149 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 OR11H6Q8NGC7 330 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 TTTY13Q9BZ97 58 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 A0A087WWL8 130 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 NPYP01303 97 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 CRYBA4P53673 196 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 DPH3P1Q9H4G8 78 aa9.97□□□□□ -0.81
SLC6A1-201ENST00000287766 NCKAP5O14513 1909 aa9.96□□□□□ -0.81
SLC6A1-201ENST00000287766 HLA-DRB4P13762 266 aa9.96□□□□□ -0.81
SLC6A1-201ENST00000287766 ERCC8Q13216 396 aa9.96□□□□□ -0.81
SLC6A1-201ENST00000287766 IGFL3Q6UXB1 125 aa9.96□□□□□ -0.81
SLC6A1-201ENST00000287766 HLA-DRB4X5D2U9 266 aa9.96□□□□□ -0.81
SLC6A1-201ENST00000287766 WDFY4Q6ZS81 3184 aa9.96□□□□□ -0.81
SLC6A1-201ENST00000287766 VCYO14598 125 aa9.96□□□□□ -0.81
SLC6A1-201ENST00000287766 POU2AF1Q16633 256 aa9.96□□□□□ -0.82
SLC6A1-201ENST00000287766 BRD3OSQ6XYD6 125 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms