RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 J3QKU1 62 aa10.65□□□□□ -0.7
NEK9-201ENST00000238616 TIRAPP58753 221 aa10.65□□□□□ -0.7
NEK9-201ENST00000238616 COL4A6Q14031 1691 aa10.65□□□□□ -0.71
NEK9-201ENST00000238616 SPATA25Q9BR10 227 aa10.65□□□□□ -0.71
NEK9-201ENST00000238616 HIVEP2P31629 2446 aa10.65□□□□□ -0.71
NEK9-201ENST00000238616 SHISA3A0PJX4 238 aa10.64□□□□□ -0.71
NEK9-201ENST00000238616 IGKV1-27A0A075B6S5 117 aa10.64□□□□□ -0.71
NEK9-201ENST00000238616 C8orf86Q6ZUL3 223 aa10.64□□□□□ -0.71
NEK9-201ENST00000238616 COL4A5P29400 1685 aa10.64□□□□□ -0.71
NEK9-201ENST00000238616 CCL24O00175 119 aa10.64□□□□□ -0.71
NEK9-201ENST00000238616 ZFP36L1Q07352 338 aaKnown RBP10.64□□□□□ -0.71
NEK9-201ENST00000238616 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
NEK9-201ENST00000238616 HGFACQ04756 655 aa10.64□□□□□ -0.71
NEK9-201ENST00000238616 MAJINQ3KP22 176 aa10.64□□□□□ -0.71
NEK9-201ENST00000238616 WFDC9Q8NEX5 89 aa10.64□□□□□ -0.71
NEK9-201ENST00000238616 COL5A1P20908 1838 aaPredicted RBP10.63□□□□□ -0.71
NEK9-201ENST00000238616 ASPHD1Q5U4P2 390 aa10.63□□□□□ -0.71
NEK9-201ENST00000238616 TSSC4Q9Y5U2 329 aaPredicted RBP10.63□□□□□ -0.71
NEK9-201ENST00000238616 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
NEK9-201ENST00000238616 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
NEK9-201ENST00000238616 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
NEK9-201ENST00000238616 HS3ST6Q96QI5 342 aa10.63□□□□□ -0.71
NEK9-201ENST00000238616 LRCOL1A6NCL2 159 aa10.63□□□□□ -0.71
NEK9-201ENST00000238616 OOSP1A8MZH6 123 aa10.63□□□□□ -0.71
NEK9-201ENST00000238616 MYO18BQ8IUG5 2567 aa10.63□□□□□ -0.71
NEK9-201ENST00000238616 C1orf43Q9BWL3 253 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 ESM1Q9NQ30 184 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 AMBPP02760 352 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 ZNF124Q15973 351 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 ETDCA0A1B0GVM5 59 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 UBE2CO00762 179 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 UBE2AP49459 152 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 TRAV13-2A0A0B4J235 113 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 SEC61GP60059 68 aa10.62□□□□□ -0.71
NEK9-201ENST00000238616 IGKV1D-17A0A075B6S4 117 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 IFITM1P13164 125 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 TMEM75Q8N9X5 138 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 RNF183Q96D59 192 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 RHODO00212 210 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 SVIPQ8NHG7 77 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 LINC01551Q86U37 167 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 IGKV1-12A0A0C4DH73 117 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 IGKV1D-12P01611 117 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 IGHV3-33P01772 117 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 IGHV3-30-3P0DP02 117 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 LTBP1Q14766 1721 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 TMEM258P61165 79 aa10.61□□□□□ -0.71
NEK9-201ENST00000238616 F8W735 103 aaPredicted RBP10.6□□□□□ -0.71
NEK9-201ENST00000238616 LYPD1Q8N2G4 141 aa10.6□□□□□ -0.71
NEK9-201ENST00000238616 TMEM141Q96I45 108 aa10.6□□□□□ -0.71
NEK9-201ENST00000238616 C9orf47Q6ZRZ4 202 aa10.6□□□□□ -0.71
NEK9-201ENST00000238616 CCL18P55774 89 aa10.6□□□□□ -0.71
NEK9-201ENST00000238616 ZNF134P52741 427 aa10.6□□□□□ -0.71
NEK9-201ENST00000238616 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.59□□□□□ -0.71
NEK9-201ENST00000238616 IGKV2-29A2NJV5 120 aaPredicted RBP10.59□□□□□ -0.71
NEK9-201ENST00000238616 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 IGHG2P01859 326 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 LINC00114Q6XXX2 140 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 CPAMD8Q8IZJ3 1885 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 BOD1L2Q8IYS8 172 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 IGLV3-12A0A075B6K2 115 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 IGLV3-19P01714 112 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 PFN1P07737 140 aaKnown RBP10.59□□□□□ -0.71
NEK9-201ENST00000238616 LMO1P25800 156 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 ORMDL1Q9P0S3 153 aa10.59□□□□□ -0.71
NEK9-201ENST00000238616 IGHV2-70DA0A0C4DH43 119 aa10.58□□□□□ -0.72
NEK9-201ENST00000238616 FUSP35637 526 aaKnown RBP eCLIP10.58□□□□□ -0.72
NEK9-201ENST00000238616 HIVEP3Q5T1R4 2406 aa10.58□□□□□ -0.72
NEK9-201ENST00000238616 IGHV4OR15-8A0A075B7B6 117 aa10.58□□□□□ -0.72
NEK9-201ENST00000238616 A0A087WW49 117 aa10.58□□□□□ -0.72
NEK9-201ENST00000238616 LRRK2Q5S007 2527 aa10.58□□□□□ -0.72
NEK9-201ENST00000238616 RNF5Q99942 180 aa10.58□□□□□ -0.72
NEK9-201ENST00000238616 WDR83OSQ9Y284 106 aa10.58□□□□□ -0.72
NEK9-201ENST00000238616 MST1P26927 711 aa10.58□□□□□ -0.72
NEK9-201ENST00000238616 HIST3H2BBQ8N257 126 aa10.58□□□□□ -0.72
NEK9-201ENST00000238616 REG4Q9BYZ8 158 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 FAM104BQ5XKR9 115 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 C3orf79P0CE67 100 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 PDE6HQ13956 83 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 C5orf38Q86SI9 138 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 Q86TA4 180 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 NDUFA12Q9UI09 145 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 NTN3O00634 580 aaPredicted RBP10.57□□□□□ -0.72
NEK9-201ENST00000238616 CRYBA4P53673 196 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 C2orf66Q6UXQ4 117 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 U3KQE9 123 aa10.57□□□□□ -0.72
NEK9-201ENST00000238616 HERVK_113P63121 156 aa10.56□□□□□ -0.72
NEK9-201ENST00000238616 LAIR2Q6ISS4 152 aa10.56□□□□□ -0.72
NEK9-201ENST00000238616 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
NEK9-201ENST00000238616 TM2D2Q9BX73 214 aa10.56□□□□□ -0.72
NEK9-201ENST00000238616 ZNF581Q9P0T4 197 aa10.56□□□□□ -0.72
NEK9-201ENST00000238616 FBLN5Q9UBX5 448 aa10.56□□□□□ -0.72
NEK9-201ENST00000238616 H0YIZ8 118 aa10.56□□□□□ -0.72
NEK9-201ENST00000238616 GYPEP15421 78 aa10.56□□□□□ -0.72
NEK9-201ENST00000238616 ZFYVE26Q68DK2 2539 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms