RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Lypd3Q91YK8 363 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Bpifa5Q9CQX3 270 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 P01822 137 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Tmem54Q9D7S1 219 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Pcnx2Q5DU28 2122 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Sdk1Q3UH53 2193 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Nkain3Q3URJ8 181 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Tnfrsf13cQ9D8D0 175 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Rnase2bO35292 155 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Klf12O35738 402 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 PilraQ2YFS3 302 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Apobec4Q497M3 374 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 GfralQ6SJE0 393 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 H2al3Q9D4U4 128 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 TinagQ9WUR0 475 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Dcaf10A2AKB9 566 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 P18524 117 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Tmem126aQ9D8Y1 196 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Zfhx2Q2MHN3 2562 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 V1rd19Q3KNP5 305 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 SergefQ80YD6 464 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Fbxo15Q9QZN0 433 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 SftpcP21841 193 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Trav3-3Q5R1C3 114 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 4930447A16RikQ9D5F6 132 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 EsdQ9R0P3 282 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Igkv1-133A0A0B4J1H8 120 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Hide1Q75VT8 222 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Muc15Q8C6Z1 331 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Scnm1Q8K136 229 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Olfr1350Q8VF34 308 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 A930017K11RikE0CXQ2 571 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Trdv2-2Q5R1A4 116 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Lhfpl6Q8BM86 200 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm10118Q8C8J5 116 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Trav15-2-dv6-2A0A075B650 123 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Ucp2P70406 309 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Klk1b21Q61759 261 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 SriQ6P069 198 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Hdgfl3Q9JMG7 202 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Cisd3B1AR13 137 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Fam241aQ9CZL2 131 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Eml5Q8BQM8 1977 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 BC053393A0A0B4J1F6 192 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Trav12-1A0N8R1 115 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Olfr1328B1ARV2 313 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Mesp1P97309 243 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Olfr148Q60887 310 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Cox19Q8K0C8 92 aa14.29□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 BokO35425 213 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Psg26Q4KL65 475 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Eml2Q7TNG5 649 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm5148Q8BGG2 154 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Immp2lQ8BPT6 175 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Anapc13Q8R034 74 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Prss29Q99MS4 279 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Mrpl43Q99N89 183 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Cphx2Q8BX39 182 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Rnase4Q9JJH1 148 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Lypd2Q9DD23 127 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Mrgprb2Q3KNA1 338 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Vdac1Q60932 296 aaKnown RBP14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 StrcQ8VIM6 1809 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Smim19Q80ZU4 107 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Bsph1Q3UW26 133 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Depp1Q8K2F3 205 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Prr30Q9D9B7 401 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 MyogP12979 224 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Nutf2P61971 127 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 GalnsQ571E4 520 aa14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Ptrh2Q8R2Y8 181 aaKnown RBP14.28□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 P01637 128 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Rtl6Q505G4 243 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm35315A0A1B0GRI2 571 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Olfr556E9Q549 324 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Mex3aG3UYU0 520 aaKnown RBP14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Dlx6P70397 175 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 GalmQ8K157 342 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Cd96Q3U0X8 602 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Psg22Q810J1 475 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Elovl5Q8BHI7 299 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm5868Q8BJG1 145 aa14.27□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Igkv10-94A0A075B5L1 115 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 MiaQ61865 130 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Klf17Q8CFA7 341 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr961Q9EQ84 314 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Scgb1b2O35176 93 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Zfp2P08043 459 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Col9a2Q07643 688 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Tff3Q62395 81 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr1183Q8VFF8 303 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Defb7Q91V70 71 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Vsig8Q6P3A4 417 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Derl1Q99J56 251 aa14.27□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 ChtopQ9CY57 249 aaKnown RBP14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Dda1Q9D9Z5 102 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Gm6970F7DCP6 221 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 PyyQ9EPS2 98 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Ncor1Q60974 2453 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr753-ps1A0A140LHN3 164 aa14.26□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms