RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Hs3st3b1Q9QZS6 390 aa9.15□□□□□ -0.94
Msh3-201ENSMUST00000022220 Gm9602J3QPD5 205 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 TfpiO54819 306 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Spam1P48794 512 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Rpl31P62900 125 aaKnown RBP9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Nr2c2apQ3TV70 140 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Vkorc1l1Q6TEK5 176 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Znf474Q6V5K9 347 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1474Q7TQQ8 314 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1434Q7TQR9 312 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Slc25a16Q8C0K5 332 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cdc34Q8CFI2 235 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Loxl4Q924C6 757 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cds2Q99L43 444 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gp2Q9D733 531 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ypel1Q9ESC7 118 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Tbx21Q9JKD8 530 aa9.15□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm28845A0A087WR76 214 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ctxnd1A0A1B0GST9 59 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Tmem139E9PX92 214 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm19684G3UZ45 117 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Otx1P80205 355 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Zfp936Q3ULA8 456 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cd200r1lQ6XJV6 249 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr875Q7TRE5 310 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Tmem11Q8BK08 190 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr368Q8VF22 327 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Trappc2lQ9JME7 139 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Igkv1-132A0A0B4J1H9 120 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Iglv3A0A0B4J1K5 122 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ca11O70354 328 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Rpp30O88796 268 aaKnown RBP9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Dynlt3P56387 116 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Smim15Q3UTD9 74 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Psg27Q497W2 474 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 HpxQ91X72 460 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Slc25a10Q9QZD8 287 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm12728V9GX31 77 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 HelzQ6DFV5 1964 aaKnown RBP9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Lgals9O08573 353 aaKnown RBP9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Tctn2Q2MV57 700 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cln5Q3UMW8 341 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr139Q60891 315 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ypel4Q65Z93 127 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1472Q7TQQ9 314 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm10309Q8C648 119 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 1700001C19RikQ8K168 210 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Obp2aQ8K1H9 176 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1392Q8VFA6 311 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr195Q8VGQ6 308 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Sfxn4Q925N1 313 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ceacam11Q9D0Z8 303 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr926Q9EQ98 308 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Col5a3Q9JLI2 1739 aa9.14□□□□□ -0.95
Msh3-201ENSMUST00000022220 Trav12-1A0N8R1 115 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Eid2bE9Q2Y0 151 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Thap8E9Q695 213 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm20830J3KML6 227 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 P01680 129 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 CortP56469 109 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Prss44Q402U7 372 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Pafah1b2Q61206 229 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ankrd55Q8BLD6 626 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ly96Q9JHF9 160 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1016A2ASV2 309 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gm20767O70517 169 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Iglc2P01844 104 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Tmem184aQ3UFJ6 425 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Zfp941Q3URY5 674 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Gpank1Q61858 372 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1356Q7TQU8 320 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 EtdQ80SW5 59 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Nrn1Q8CFV4 142 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Coa3Q9D2R6 108 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cd5lQ9QWK4 352 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ccl8Q9Z121 97 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 1700025C18RikA2A580 89 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Q24JP4 165 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 EcscrQ3TZW0 214 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Cacng8Q8VHW2 423 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Sh3bgrl3Q91VW3 93 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Mogat1Q91ZV4 335 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 3100002H09RikQ9CXW6 140 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr972Q9EQA2 314 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Zfp292Q9Z2U2 2698 aa9.13□□□□□ -0.95
Msh3-201ENSMUST00000022220 Rps2-ps6A0A140T8L5 221 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Pglyrp3A1A547 347 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 1810011H11RikE9PVZ2 95 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Pde6dO55057 150 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Hoxb2P0C1T1 354 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Hspb7P35385 169 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Znrf2Q71FD5 238 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Zfp799Q8BHK4 648 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Phf13Q8K2W6 296 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Olfr1265Q8VEZ3 309 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Ppp1r14aQ91VC7 147 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Bahcc1Q3UHR0 2643 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Vmn1r149E9PWL6 307 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Vmn1r101E9Q365 307 aa9.12□□□□□ -0.95
Msh3-201ENSMUST00000022220 Vmn1r158G3UY92 307 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms