RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 TMUB1Q9BVT8 246 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 MS4A6AQ9H2W1 248 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 CGB1A6NKQ9 187 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 EVI2AP22794 236 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 LOC389332A0A1B0GUA5 103 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 A8MWL6 223 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 CT45A10P0DMU9 189 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 Q6AWC8 147 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 ZNF833PQ6ZTB9 187 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 NFE4Q86UQ8 179 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 NUP35Q8NFH5 326 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 C11orf52Q96A22 123 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 GRAMD2BQ96HH9 432 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 AJUBAQ96IF1 538 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 CSDC2Q9Y534 153 aaKnown RBP8.51□□□□□ -1.05
CDH1-214ENST00000621016 LTAP01374 205 aa8.5□□□□□ -1.05
CDH1-214ENST00000621016 IGHV3-23P01764 117 aa8.5□□□□□ -1.05
CDH1-214ENST00000621016 LOXP28300 417 aaPredicted RBP8.5□□□□□ -1.05
CDH1-214ENST00000621016 FOXI1Q12951 378 aa8.5□□□□□ -1.05
CDH1-214ENST00000621016 PRNTQ86SH4 94 aa8.5□□□□□ -1.05
CDH1-214ENST00000621016 E7EQL1 145 aa8.5□□□□□ -1.05
CDH1-214ENST00000621016 A0A087WX48 190 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 TCRBV4S1A1TA0A5B7 111 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 RPL27AP46776 148 aaKnown RBP8.49□□□□□ -1.05
CDH1-214ENST00000621016 LINC00322Q6ZN03 302 aaPredicted RBP8.49□□□□□ -1.05
CDH1-214ENST00000621016 ZNF329Q86UD4 541 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 TTC9CQ8N5M4 171 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 F8W1H4 67 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 IGHV1-8P0DP01 117 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 CIARTQ8N365 385 aaPredicted RBP8.49□□□□□ -1.05
CDH1-214ENST00000621016 RPEQ96AT9 228 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 OSTCQ9NRP0 149 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 IGKV1D-37A0A075B6S9 117 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 CACNG7P62955 275 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 GOLT1AQ6ZVE7 132 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 C17orf77Q96MU5 243 aa8.49□□□□□ -1.05
CDH1-214ENST00000621016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.48□□□□□ -1.05
CDH1-214ENST00000621016 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 TEX36Q5VZQ5 186 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 OR1L4Q8NGR5 311 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 FXYD5Q96DB9 178 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 LOC107984156A0A0G2JMH3 177 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 C5orf47Q569G3 176 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 ARL17AQ8IVW1 177 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 GTSF1Q8WW33 167 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 PIMREGQ9BSJ6 248 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 SOX21Q9Y651 276 aaPredicted RBP8.48□□□□□ -1.05
CDH1-214ENST00000621016 CACNA1AO00555 2505 aa8.48□□□□□ -1.05
CDH1-214ENST00000621016 SMAD7O15105 426 aaKnown RBP8.47□□□□□ -1.05
CDH1-214ENST00000621016 FGF6P10767 208 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 GAGE2BQ13066 116 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 GAGE2EQ4V326 116 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 TMEM167AQ8TBQ9 72 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 IGF2BP2-AS1Q96M15 143 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 GAGE2DQ9UEU5 116 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 EPDR1Q9UM22 224 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 IGLV2-23P01705 113 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 FAM106CPP0CH98 169 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 FAM106AQ4KMX7 169 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 IGFL3Q6UXB1 125 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 Q6ZQT7 251 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 P01737 135 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 COL8A1P27658 744 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 SRSF1Q07955 248 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDH1-214ENST00000621016 KLRD1Q13241 179 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 TMEM133Q9H2Q1 129 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 Q9H3A6 140 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 CUBNO60494 3623 aa8.47□□□□□ -1.05
CDH1-214ENST00000621016 TRAV4A0A0B4J268 109 aa8.46□□□□□ -1.05
CDH1-214ENST00000621016 NCBP2LA6PVI3 153 aaKnown RBP8.46□□□□□ -1.05
CDH1-214ENST00000621016 NDUFV3P56181 108 aaKnown RBP8.46□□□□□ -1.05
CDH1-214ENST00000621016 IGFL4Q6B9Z1 124 aa8.46□□□□□ -1.05
CDH1-214ENST00000621016 TRAV9-1A0A075B6T8 112 aa8.46□□□□□ -1.06
CDH1-214ENST00000621016 M0R3E3 92 aa8.46□□□□□ -1.06
CDH1-214ENST00000621016 CRLF1O75462 422 aa8.46□□□□□ -1.06
CDH1-214ENST00000621016 LINC00694P0DN24 101 aa8.46□□□□□ -1.06
CDH1-214ENST00000621016 RPL7P18124 248 aaKnown RBP8.46□□□□□ -1.06
CDH1-214ENST00000621016 HRNRQ86YZ3 2850 aaPredicted RBP8.46□□□□□ -1.06
CDH1-214ENST00000621016 SMIM27A0A1W2PRY6 76 aa8.46□□□□□ -1.06
CDH1-214ENST00000621016 IGLL5B9A064 214 aa8.46□□□□□ -1.06
CDH1-214ENST00000621016 PSMB2P49721 201 aa8.46□□□□□ -1.06
CDH1-214ENST00000621016 PPP1R27Q86WC6 154 aa8.46□□□□□ -1.06
CDH1-214ENST00000621016 NUP37Q8NFH4 326 aa8.46□□□□□ -1.06
CDH1-214ENST00000621016 MRPL32Q9BYC8 188 aaKnown RBP8.46□□□□□ -1.06
CDH1-214ENST00000621016 CSPG4Q6UVK1 2322 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 SRSF2Q01130 221 aaKnown RBP8.45□□□□□ -1.06
CDH1-214ENST00000621016 Q8NA96 180 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 RASL11BQ9BPW5 248 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 KLK5Q9Y337 293 aaPredicted RBP8.45□□□□□ -1.06
CDH1-214ENST00000621016 HIVEP3Q5T1R4 2406 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 IGHV3OR16-13A0A075B7E8 117 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 IGHV3-74A0A0B4J1X5 117 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 TRAV25A0A0B4J276 109 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 APOHP02749 345 aaPredicted RBP8.45□□□□□ -1.06
CDH1-214ENST00000621016 CD3EP07766 207 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 SRSF12Q8WXF0 261 aaKnown RBP8.45□□□□□ -1.06
CDH1-214ENST00000621016 MBD6Q96DN6 1003 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 SIGLEC9Q9Y336 463 aa8.45□□□□□ -1.06
CDH1-214ENST00000621016 IGHV1-3A0A0C4DH29 117 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms