RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 PRSS57Q6UWY2 283 aa14.91□□□□□ -0.02
SEMA3B-210ENST00000611067 TNFRSF14Q92956 283 aa14.91□□□□□ -0.02
SEMA3B-210ENST00000611067 FLNCQ14315 2725 aa14.91□□□□□ -0.02
SEMA3B-210ENST00000611067 USP9XQ93008 2570 aaPredicted RBP14.91□□□□□ -0.02
SEMA3B-210ENST00000611067 DCHS2Q6V1P9 2916 aa14.91□□□□□ -0.02
SEMA3B-210ENST00000611067 PRB4P10163 310 aaPredicted RBP14.91□□□□□ -0.02
SEMA3B-210ENST00000611067 PSMG4Q5JS54 123 aa14.91□□□□□ -0.02
SEMA3B-210ENST00000611067 SMIM13P0DJ93 91 aa14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 SAMD5Q5TGI4 173 aa14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 ZNF491Q8N8L2 437 aa14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 CHTOPQ9Y3Y2 248 aaKnown RBP14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 TMSB15BA0A087X1C1 80 aa14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 SH2D1AO60880 128 aa14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 NPYP01303 97 aa14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 CKS2P33552 79 aa14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 ONECUT1Q9UBC0 465 aa14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 DKK2Q9UBU2 259 aa14.9□□□□□ -0.02
SEMA3B-210ENST00000611067 IGHV1-3A0A0C4DH29 117 aa14.89□□□□□ -0.03
SEMA3B-210ENST00000611067 PDE6HQ13956 83 aa14.89□□□□□ -0.03
SEMA3B-210ENST00000611067 RNF125Q96EQ8 232 aa14.89□□□□□ -0.03
SEMA3B-210ENST00000611067 SPOCK3Q9BQ16 436 aa14.89□□□□□ -0.03
SEMA3B-210ENST00000611067 FBXL15Q9H469 300 aa14.89□□□□□ -0.03
SEMA3B-210ENST00000611067 HIGD1BQ9P298 99 aa14.89□□□□□ -0.03
SEMA3B-210ENST00000611067 AKAP6Q13023 2319 aa14.89□□□□□ -0.03
SEMA3B-210ENST00000611067 K7EIM0 57 aa14.89□□□□□ -0.03
SEMA3B-210ENST00000611067 AAMDCQ9H7C9 122 aa14.89□□□□□ -0.03
SEMA3B-210ENST00000611067 WI2-2373I1.2A0A1W2PRP0 233 aa14.88□□□□□ -0.03
SEMA3B-210ENST00000611067 CIDEAO60543 219 aa14.88□□□□□ -0.03
SEMA3B-210ENST00000611067 COX8CQ7Z4L0 72 aa14.88□□□□□ -0.03
SEMA3B-210ENST00000611067 SRSF8Q9BRL6 282 aaKnown RBP14.88□□□□□ -0.03
SEMA3B-210ENST00000611067 FBLL1A6NHQ2 334 aaKnown RBP14.87□□□□□ -0.03
SEMA3B-210ENST00000611067 IGLV1-47P01700 117 aa14.87□□□□□ -0.03
SEMA3B-210ENST00000611067 IL4P05112 153 aa14.87□□□□□ -0.03
SEMA3B-210ENST00000611067 PLGLAQ15195 96 aa14.87□□□□□ -0.03
SEMA3B-210ENST00000611067 LY6G5BQ8NDX9 201 aa14.87□□□□□ -0.03
SEMA3B-210ENST00000611067 SMKR1H3BMG3 65 aa14.87□□□□□ -0.03
SEMA3B-210ENST00000611067 FCGR2BP31994 310 aaPredicted RBP14.87□□□□□ -0.03
SEMA3B-210ENST00000611067 CCL19Q99731 98 aa14.87□□□□□ -0.03
SEMA3B-210ENST00000611067 COL12A1Q99715 3063 aa14.87□□□□□ -0.03
SEMA3B-210ENST00000611067 ZMAT4Q9H898 229 aa14.86□□□□□ -0.03
SEMA3B-210ENST00000611067 FXYD2P54710 66 aa14.86□□□□□ -0.03
SEMA3B-210ENST00000611067 BCL6BQ8N143 479 aaPredicted RBP14.86□□□□□ -0.03
SEMA3B-210ENST00000611067 LINC01546A6NGU7 62 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 GCSHP23434 173 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 TWIST1Q15672 202 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 TM4SF20Q53R12 229 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 S100A7AQ86SG5 101 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 BUB1B-PAK6H3BSN5 160 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 COX7A1P24310 79 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 DLX1P56177 255 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 WFDC3Q8IUB2 231 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 HHLA3Q9XRX5 114 aa14.85□□□□□ -0.03
SEMA3B-210ENST00000611067 ODF1Q14990 250 aa14.84□□□□□ -0.03
SEMA3B-210ENST00000611067 MAP1LC3AQ9H492 121 aa14.84□□□□□ -0.03
SEMA3B-210ENST00000611067 IGKV2D-26A0A0A0MRZ7 120 aa14.83□□□□□ -0.03
SEMA3B-210ENST00000611067 EGR2P11161 476 aaPredicted RBP14.83□□□□□ -0.03
SEMA3B-210ENST00000611067 PRB3Q04118 309 aaPredicted RBP14.83□□□□□ -0.03
SEMA3B-210ENST00000611067 C18orf15Q96N68 181 aa14.83□□□□□ -0.03
SEMA3B-210ENST00000611067 RNF5Q99942 180 aa14.83□□□□□ -0.03
SEMA3B-210ENST00000611067 BPESC1Q9GZL8 116 aa14.83□□□□□ -0.03
SEMA3B-210ENST00000611067 M0R1W7 72 aa14.83□□□□□ -0.04
SEMA3B-210ENST00000611067 IGHV4-39P01824 125 aa14.83□□□□□ -0.04
SEMA3B-210ENST00000611067 IGLC6P0CF74 106 aa14.83□□□□□ -0.04
SEMA3B-210ENST00000611067 ZNF562Q6V9R5 426 aa14.83□□□□□ -0.04
SEMA3B-210ENST00000611067 PRR25Q96S07 402 aa14.83□□□□□ -0.04
SEMA3B-210ENST00000611067 CHAC1Q9BUX1 264 aa14.83□□□□□ -0.04
SEMA3B-210ENST00000611067 TEX48A0A1B0GUV7 120 aa14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 RPL24P83731 157 aaKnown RBP14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 SAMD13Q5VXD3 122 aa14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 PHLDA1Q8WV24 401 aaPredicted RBP14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 VGLL1Q99990 258 aa14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 CNIH1O95406 144 aa14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 FCER1GP30273 86 aa14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 BMI1P35226 326 aa14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 IGFBPL1Q8WX77 278 aa14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 RNF185Q96GF1 192 aa14.82□□□□□ -0.04
SEMA3B-210ENST00000611067 EVI2AP22794 236 aa14.81□□□□□ -0.04
SEMA3B-210ENST00000611067 LINC01559Q495D7 138 aa14.81□□□□□ -0.04
SEMA3B-210ENST00000611067 ARHGAP32A7KAX9 2087 aa14.81□□□□□ -0.04
SEMA3B-210ENST00000611067 IGKV2-40A0A087WW87 121 aaPredicted RBP14.81□□□□□ -0.04
SEMA3B-210ENST00000611067 IGKV2D-40P01614 121 aaPredicted RBP14.81□□□□□ -0.04
SEMA3B-210ENST00000611067 LEPP41159 167 aa14.81□□□□□ -0.04
SEMA3B-210ENST00000611067 RPEQ96AT9 228 aa14.81□□□□□ -0.04
SEMA3B-210ENST00000611067 IGKCP01834 107 aa14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 COX6B1P14854 86 aa14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 TM2D2Q9BX73 214 aa14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 NXT2Q9NPJ8 142 aaKnown RBP14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 TRBV25-1A0A075B6N4 114 aa14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 SCGB1A1P11684 91 aa14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 TMEM11P17152 192 aa14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 SRSF2Q01130 221 aaKnown RBP14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 SRSF1Q07955 248 aaKnown RBP eCLIP14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 CNFNQ9BYD5 112 aa14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 TTTY13Q9BZ97 58 aa14.8□□□□□ -0.04
SEMA3B-210ENST00000611067 FAM208BQ5VWN6 2430 aa14.79□□□□□ -0.04
SEMA3B-210ENST00000611067 GNG7O60262 68 aa14.79□□□□□ -0.04
SEMA3B-210ENST00000611067 PRSS1P07477 247 aa14.79□□□□□ -0.04
SEMA3B-210ENST00000611067 HLA-DRB4P13762 266 aa14.79□□□□□ -0.04
SEMA3B-210ENST00000611067 ZNF80P51504 273 aaPredicted RBP14.79□□□□□ -0.04
SEMA3B-210ENST00000611067 ZNF575Q86XF7 245 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms