RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	ISOC1	Q96CN7	298 aa		0.73	□□□□□ -2.29
SOX2-OT-231	ENST00000599082	GABARAP	H6UMI1	98 aa		0.72	□□□□□ -2.29
SOX2-OT-231	ENST00000599082	PRH1	P02810	166 aa		0.72	□□□□□ -2.29
SOX2-OT-231	ENST00000599082	SPINT3	P49223	89 aa		0.72	□□□□□ -2.29
SOX2-OT-231	ENST00000599082	RPL37A	P61513	92 aa	Known RBP	0.72	□□□□□ -2.29
SOX2-OT-231	ENST00000599082		Q86TA4	180 aa		0.72	□□□□□ -2.29
SOX2-OT-231	ENST00000599082	NEDD8	Q15843	81 aa		0.71	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	TMEM78	Q5T7P6	136 aa		0.71	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	RMND5B	Q96G75	393 aa	Predicted RBP	0.71	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	CCL19	Q99731	98 aa		0.71	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	CACNA1E	Q15878	2313 aa		0.71	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	NIN	Q8N4C6	2090 aa		0.7	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	ZNF137P	P52743	207 aa		0.7	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	CASC2	Q6XLA1	102 aa		0.7	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	OR5H6	Q8NGV6	325 aa		0.7	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	ZCCHC11	Q5TAX3	1644 aa	Known RBP	0.7	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	KIAA1549L	Q6ZVL6	1849 aa		0.69	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	C5orf58	C9J3I9	102 aa		0.69	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	TRAC	P01848	142 aa		0.69	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	BCL2	P10415	239 aa		0.69	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	CCL4	P13236	92 aa		0.69	□□□□□ -2.3
SOX2-OT-231	ENST00000599082		Q6ZS92	163 aa		0.69	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	STX12	Q86Y82	276 aa		0.69	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	OR5AK2	Q8NH90	309 aa		0.69	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	ANK1	P16157	1881 aa		0.68	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	S100A11	P31949	105 aa		0.68	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	C6orf52	Q5T4I8	152 aa		0.68	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	PLAC4	Q8WY50	150 aa		0.68	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	PRELID3A	Q96N28	172 aa		0.68	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	SMR3A	Q99954	134 aa		0.68	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	PCBD2	Q9H0N5	130 aa		0.68	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	USP54	Q70EL1	1684 aa		0.68	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	C3orf85	A0A1B0GTC6	90 aa		0.67	□□□□□ -2.3
SOX2-OT-231	ENST00000599082		A6NN06	94 aa		0.67	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	IGHV3-30	P01768	117 aa		0.67	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	IGHV3-30-5	P0DP03	117 aa		0.67	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	SDC2	P34741	201 aa		0.67	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	C10orf111	Q8N326	155 aa		0.67	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	CLEC2B	Q92478	149 aa		0.67	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	LAMTOR2	Q9Y2Q5	125 aa		0.67	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	CTTNBP2	Q8WZ74	1663 aa		0.67	□□□□□ -2.3
SOX2-OT-231	ENST00000599082		A0A1W2PRE2	83 aa		0.66	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	PHGR1	C9JFL3	82 aa		0.66	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	NDUFA6	P56556	154 aa		0.66	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	GRPEL2	Q8TAA5	225 aa		0.66	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	LPAR5	Q9H1C0	372 aa		0.66	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	NAV2	Q8IVL1	2488 aa		0.66	□□□□□ -2.3
SOX2-OT-231	ENST00000599082	CCDC32	Q9BV29	185 aa		0.65	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	PLAC8	Q9NZF1	115 aa		0.65	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	JPT1	Q9UK76	154 aa		0.65	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	TCOF1	Q13428	1488 aa	Known RBP	0.65	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	KCP	Q6ZWJ8	1503 aa		0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	DLC1	Q96QB1	1528 aa		0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	TPT1	P13693	172 aa	Known RBP	0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	SPINK7	P58062	85 aa		0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	MAX	P61244	160 aa		0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	LINC00305	Q7Z4B0	112 aa		0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	C5orf17	Q8NAS9	161 aa		0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	CIB3	Q96Q77	187 aa	Predicted RBP	0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	FAM103A1	Q9BTL3	118 aa	Known RBP	0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	ATPIF1	Q9UII2	106 aa		0.64	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	LOC285556	D6RIA3	1793 aa		0.63	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	FXYD6P3	P58550	94 aa		0.63	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	HRCT1	Q6UXD1	115 aa		0.63	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	IZUMO2	Q6UXV1	221 aa		0.63	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	TRPM7	Q96QT4	1865 aa		0.63	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	TRBV27	A0A0K0K1C4	114 aa		0.62	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	KRTAP2-3	P0C7H8	128 aa		0.62	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	SAA1	P0DJI8	122 aa	Predicted RBP	0.62	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	KDELR1	P24390	212 aa		0.62	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	TEX29	Q8N6K0	151 aa		0.62	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	NABP2	Q9BQ15	211 aa		0.62	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	KRTAP2-4	Q9BYR9	128 aa		0.62	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	KRTAP2-1	Q9BYU5	128 aa		0.62	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	FKBP11	Q9NYL4	201 aa		0.62	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	FER1L6	Q2WGJ9	1857 aa		0.61	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	PFDN1	O60925	122 aa		0.61	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	SULT1C4	O75897	302 aa		0.61	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	AP1S3	Q96PC3	154 aa		0.61	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	MED31	Q9Y3C7	131 aa		0.61	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	ATG2A	Q2TAZ0	1938 aa		0.61	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	BCORL1	Q5H9F3	1711 aa		0.61	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	CSAG1	Q6PB30	78 aa		0.6	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	THEM6	Q8WUY1	208 aa		0.6	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.6	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	FAM135B	Q49AJ0	1406 aa		0.59	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	TRAV13-1	A0A0B4J241	112 aa		0.59	□□□□□ -2.31
SOX2-OT-231	ENST00000599082		E7EQ34	232 aa		0.59	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	CAV3	P56539	151 aa		0.59	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	TMEM229B	Q8NBD8	167 aa		0.59	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	LXN	Q9BS40	222 aa		0.59	□□□□□ -2.31
SOX2-OT-231	ENST00000599082	DSPP	Q9NZW4	1301 aa		0.59	□□□□□ -2.32
SOX2-OT-231	ENST00000599082	FGD6	Q6ZV73	1430 aa		0.58	□□□□□ -2.32
SOX2-OT-231	ENST00000599082	LOC107984156	A0A0G2JMH3	177 aa		0.58	□□□□□ -2.32
SOX2-OT-231	ENST00000599082	RPS3	P23396	243 aa	Known RBP eCLIP	0.58	□□□□□ -2.32
SOX2-OT-231	ENST00000599082	QRFP	P83859	136 aa		0.58	□□□□□ -2.32
SOX2-OT-231	ENST00000599082	XAF1	Q6GPH4	301 aa		0.58	□□□□□ -2.32
SOX2-OT-231	ENST00000599082	ARL17A	Q8IVW1	177 aa		0.58	□□□□□ -2.32
SOX2-OT-231	ENST00000599082	TCTEX1D1	Q8N7M0	179 aa		0.58	□□□□□ -2.32
SOX2-OT-231	ENST00000599082	MORN4	Q8NDC4	146 aa		0.58	□□□□□ -2.32

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms