RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 CDX4O14627 284 aaPredicted RBP9.84□□□□□ -0.83
LIG1-207ENST00000594759 ID1P41134 155 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 SPTBN4Q9H254 2564 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 CCDC179H3BU77 68 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 IGKV1-16P04430 117 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 MRPL23Q16540 153 aaKnown RBP9.84□□□□□ -0.83
LIG1-207ENST00000594759 C5orf47Q569G3 176 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 PRR7Q8TB68 274 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 PRO1854Q9UHT4 67 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 PRSS46E5RG02 174 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 ADIPOQQ15848 244 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 WDR86Q86TI4 376 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 PRADC1Q9BSG0 188 aa9.84□□□□□ -0.83
LIG1-207ENST00000594759 IGKV1OR2-108A0A075B7D4 117 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 GLRXP35754 106 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 C3orf36Q3SXR2 165 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 ZNF503-AS2A6NEH8 195 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 CCL8P80075 99 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 TRGV9Q99603 122 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 SPXQ9BT56 116 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 M0R381 172 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 LINC00322Q6ZN03 302 aaPredicted RBP9.83□□□□□ -0.84
LIG1-207ENST00000594759 Q8N7P7 452 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 PTPRQQ9UMZ3 2332 aa9.83□□□□□ -0.84
LIG1-207ENST00000594759 XIRP2A4UGR9 3374 aa9.82□□□□□ -0.84
LIG1-207ENST00000594759 IGKV2D-26A0A0A0MRZ7 120 aa9.82□□□□□ -0.84
LIG1-207ENST00000594759 F8VRH5 84 aa9.82□□□□□ -0.84
LIG1-207ENST00000594759 CD177Q8N6Q3 437 aa9.82□□□□□ -0.84
LIG1-207ENST00000594759 PHLDA3Q9Y5J5 127 aa9.82□□□□□ -0.84
LIG1-207ENST00000594759 ODF1Q14990 250 aa9.82□□□□□ -0.84
LIG1-207ENST00000594759 RPUSD1Q9UJJ7 312 aaKnown RBP9.82□□□□□ -0.84
LIG1-207ENST00000594759 B3GALT5-AS1P59052 145 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 BRWD1-AS2P59051 145 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 TCF15Q12870 199 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 TMEM133Q9H2Q1 129 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 HCFC1P51610 2035 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 IGKV2-40A0A087WW87 121 aaPredicted RBP9.81□□□□□ -0.84
LIG1-207ENST00000594759 TRAV12-3A0A0B4J271 114 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 M0QXV9 152 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 IGKV2D-40P01614 121 aaPredicted RBP9.81□□□□□ -0.84
LIG1-207ENST00000594759 COX7A1P24310 79 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 Q8N8P6 123 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 PRSS22Q9GZN4 317 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 RAB1BQ9H0U4 201 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 S4R3C0 116 aa9.81□□□□□ -0.84
LIG1-207ENST00000594759 EFNA4P52798 201 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 ZCCHC24Q8N2G6 241 aaKnown RBP9.8□□□□□ -0.84
LIG1-207ENST00000594759 CHD8Q9HCK8 2581 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 A0A087WX48 190 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
LIG1-207ENST00000594759 VWC2LB2RUY7 222 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 ZFP2Q6ZN57 461 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 C8orf49Q96NF6 230 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 HLA-DMBP28068 263 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 Q8TAT8 98 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 C19orf71A6NCJ1 209 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 J3KT08 172 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 ZNF134P52741 427 aa9.8□□□□□ -0.84
LIG1-207ENST00000594759 MFAP4P55083 255 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 TMEM30BQ3MIR4 351 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 PATE2Q6UY27 113 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 FAM57AQ8TBR7 257 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 RNF125Q96EQ8 232 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 EML6Q6ZMW3 1958 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 PTPRSQ13332 1948 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 ANKHD1Q8IWZ3 2542 aaKnown RBP9.79□□□□□ -0.84
LIG1-207ENST00000594759 IGKV3D-15A0A087WSY6 115 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 IGHV3-35A0A0C4DH35 117 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 POU2AF1Q16633 256 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 FAM216BQ8N7L0 139 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 TMEM75Q8N9X5 138 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 PROK2Q9HC23 129 aa9.79□□□□□ -0.84
LIG1-207ENST00000594759 ANKRD11Q6UB99 2663 aaPredicted RBP9.79□□□□□ -0.84
LIG1-207ENST00000594759 DAZAP2Q15038 168 aaPredicted RBP9.78□□□□□ -0.84
LIG1-207ENST00000594759 FAM27E3Q08E93 113 aa9.78□□□□□ -0.84
LIG1-207ENST00000594759 TANC2Q9HCD6 1990 aa9.78□□□□□ -0.84
LIG1-207ENST00000594759 C16orf97H3BN30 126 aa9.78□□□□□ -0.84
LIG1-207ENST00000594759 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
LIG1-207ENST00000594759 SPRR3Q9UBC9 169 aa9.78□□□□□ -0.84
LIG1-207ENST00000594759 C15orf65H3BRN8 121 aa9.77□□□□□ -0.84
LIG1-207ENST00000594759 CRYGCP07315 174 aa9.77□□□□□ -0.84
LIG1-207ENST00000594759 LYPD1Q8N2G4 141 aa9.77□□□□□ -0.84
LIG1-207ENST00000594759 C9orf106Q8NAJ2 232 aa9.77□□□□□ -0.84
LIG1-207ENST00000594759 Q8TCH9 128 aa9.77□□□□□ -0.84
LIG1-207ENST00000594759 NDUFA4L2Q9NRX3 87 aa9.77□□□□□ -0.84
LIG1-207ENST00000594759 ZNRD1Q9P1U0 126 aa9.77□□□□□ -0.84
LIG1-207ENST00000594759 RHODO00212 210 aa9.77□□□□□ -0.85
LIG1-207ENST00000594759 LINC00312Q9Y6C7 94 aa9.77□□□□□ -0.85
LIG1-207ENST00000594759 TRAV8-3A0A0A6YYJ7 113 aa9.77□□□□□ -0.85
LIG1-207ENST00000594759 FOXE3Q13461 319 aa9.77□□□□□ -0.85
LIG1-207ENST00000594759 TMEM167AQ8TBQ9 72 aa9.77□□□□□ -0.85
LIG1-207ENST00000594759 ATG2AQ2TAZ0 1938 aa9.77□□□□□ -0.85
LIG1-207ENST00000594759 IGHV3-64A0A075B6Q5 118 aa9.76□□□□□ -0.85
LIG1-207ENST00000594759 TRAV4A0A0B4J268 109 aa9.76□□□□□ -0.85
LIG1-207ENST00000594759 FAM236AA0A1B0GUQ0 79 aa9.76□□□□□ -0.85
LIG1-207ENST00000594759 FAM236BA0A1B0GV22 79 aa9.76□□□□□ -0.85
LIG1-207ENST00000594759 CECR9P0C854 216 aa9.76□□□□□ -0.85
LIG1-207ENST00000594759 IGHV1-2P23083 117 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms