RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 MRPL35Q9NZE8 188 aaKnown RBP-0.2□□□□□ -2.44
SKA2-210ENST00000584089 PYCARDQ9ULZ3 195 aa-0.2□□□□□ -2.44
SKA2-210ENST00000584089 ASB4Q9Y574 426 aa-0.2□□□□□ -2.44
SKA2-210ENST00000584089 DLEC1Q9Y238 1755 aa-0.2□□□□□ -2.44
SKA2-210ENST00000584089 SPTBN1Q01082 2364 aaKnown RBP-0.2□□□□□ -2.44
SKA2-210ENST00000584089 UHRF1BP1Q6BDS2 1440 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 CD109Q6YHK3 1445 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.21□□□□□ -2.44
SKA2-210ENST00000584089 PKDREJQ9NTG1 2253 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 CDK13Q14004 1512 aaKnown RBP-0.21□□□□□ -2.44
SKA2-210ENST00000584089 A0A096LNT2 108 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 LOC107984156A0A0G2JMH3 177 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 SULT1C4O75897 302 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 CD3DP04234 171 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 GYPBP06028 91 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 GLRXP35754 106 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 ARL17AQ8IVW1 177 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 ISOC1Q96CN7 298 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 PLEKHB2Q96CS7 222 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 CST11Q9H112 138 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 SPTA1P02549 2419 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 TRPM7Q96QT4 1865 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 KIAA0100Q14667 2235 aaKnown RBP-0.21□□□□□ -2.44
SKA2-210ENST00000584089 ZNF142P52746 1687 aaPredicted RBP-0.21□□□□□ -2.44
SKA2-210ENST00000584089 RTL9Q8NET4 1388 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 HMCN2Q8NDA2 5059 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 TNS1Q9HBL0 1735 aaKnown RBP-0.21□□□□□ -2.44
SKA2-210ENST00000584089 C2CD3Q4AC94 2353 aa-0.21□□□□□ -2.44
SKA2-210ENST00000584089 SRRM2Q9UQ35 2752 aaKnown RBP-0.22□□□□□ -2.44
SKA2-210ENST00000584089 MYH2Q9UKX2 1941 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 WDR97A6NE52 1622 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 G3V2T6 193 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 PGRMC1O00264 195 aaKnown RBP-0.22□□□□□ -2.44
SKA2-210ENST00000584089 IGF2P01344 180 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 RPS3P23396 243 aaKnown RBP eCLIP-0.22□□□□□ -2.44
SKA2-210ENST00000584089 ETV6P41212 452 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 KLKP1Q107X0 134 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 GLYATL3Q5SZD4 288 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 FKBP1CQ5VVH2 108 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 IZUMO2Q6UXV1 221 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 CASC2Q6XLA1 102 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 PHF5AQ7RTV0 110 aaKnown RBP-0.22□□□□□ -2.44
SKA2-210ENST00000584089 FAM213BQ8TBF2 198 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 AP1S3Q96PC3 154 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 RTL8AQ9BWD3 113 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 C19orf12Q9NSK7 152 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 PRNDQ9UKY0 176 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 RREB1Q92766 1687 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 KMT2AQ03164 3969 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 MAP1BP46821 2468 aaKnown RBP-0.22□□□□□ -2.44
SKA2-210ENST00000584089 CHD9Q3L8U1 2897 aa-0.22□□□□□ -2.44
SKA2-210ENST00000584089 SOGA1O94964 1423 aa-0.22□□□□□ -2.45
SKA2-210ENST00000584089 ADGRL3Q9HAR2 1447 aa-0.22□□□□□ -2.45
SKA2-210ENST00000584089 PLXNA1Q9UIW2 1896 aa-0.22□□□□□ -2.45
SKA2-210ENST00000584089 CDK12Q9NYV4 1490 aaPredicted RBP-0.22□□□□□ -2.45
SKA2-210ENST00000584089 HELZP42694 1942 aaKnown RBP-0.23□□□□□ -2.45
SKA2-210ENST00000584089 WNK1Q9H4A3 2382 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 ACANP16112 2415 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 BIVM-ERCC5R4GMW8 1640 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 CHD6Q8TD26 2715 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 LY6G6CO95867 125 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 OGNP20774 298 aaKnown RBP-0.23□□□□□ -2.45
SKA2-210ENST00000584089 SPRR2DP22532 72 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 LINC00269Q8N2A0 174 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 FAM216BQ8N7L0 139 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.23□□□□□ -2.45
SKA2-210ENST00000584089 CCL4L1Q8NHW4 92 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 NAT14Q8WUY8 206 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 PPP1R1CQ8WVI7 109 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 GPX7Q96SL4 187 aaPredicted RBP-0.23□□□□□ -2.45
SKA2-210ENST00000584089 PHB2Q99623 299 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 EFCAB11Q9BUY7 163 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 TMEM14BQ9NUH8 114 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 TRAPPC8Q9Y2L5 1435 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 TENM2Q9NT68 2774 aa-0.23□□□□□ -2.45
SKA2-210ENST00000584089 PLXNA2O75051 1894 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 NUP210Q8TEM1 1887 aaPredicted RBP-0.24□□□□□ -2.45
SKA2-210ENST00000584089 ZNF292O60281 2723 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 DCHS2Q6V1P9 2916 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 A0A0G2JMM0 328 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 NBDYA0A0U1RRE5 68 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 A0A1W2PPB8 328 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 A0A1W2PRS3 328 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 RIIAD1A6NNX1 92 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 HIGD1CA8MV81 97 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 KIR3DP1A8MWS1 328 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 H7C1C5 153 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 ATP5HO75947 161 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 APOA2P02652 100 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 IFNA6P05013 189 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 RPL35P42766 123 aaKnown RBP-0.24□□□□□ -2.45
SKA2-210ENST00000584089 LCN6P62502 163 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 GNG5P63218 68 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 REEP5Q00765 189 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 COX6A2Q02221 97 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 DIAPH2-AS1Q14236 149 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 FXYD3Q14802 87 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 MSMO1Q15800 293 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 IDO2Q6ZQW0 420 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 C3orf62Q6ZUJ4 267 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms