RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TSPOP30536 169 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 UCNP55089 124 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 TMEM219Q86XT9 240 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 TMEM70Q9BUB7 260 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 AAMDCQ9H7C9 122 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 CSPG4Q6UVK1 2322 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 K7EQM0 130 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 TAX1BP3O14907 124 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 AZU1P20160 251 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 C15orf32Q32M92 178 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 BPESC1Q9GZL8 116 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 SELENOKQ9Y6D0 94 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 SMAD5-AS1Q9Y6J3 95 aa8.17□□□□□ -1.1
TOP3A-209ENST00000580095 USP9XQ93008 2570 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-209ENST00000580095 OR4C46A6NHA9 309 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 SMKR1H3BMG3 65 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 PPIFP30405 207 aaKnown RBP8.16□□□□□ -1.1
TOP3A-209ENST00000580095 SAA4P35542 130 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 ZNF80P51504 273 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-209ENST00000580095 LOXL1Q08397 574 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-209ENST00000580095 ERCC8Q13216 396 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 AMMECR1LQ6DCA0 310 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 GFRA4Q9GZZ7 299 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 TRAV9-2A0A087WT02 112 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 TMEM8BA6NDV4 472 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 C19orf84I3L1E1 186 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 HAX1O00165 279 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 SH2D1AO60880 128 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 CLEC3BP05452 202 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 CT45A10P0DMU9 189 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 AMN1Q8IY45 258 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 Q8N9W7 124 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 FER1L6-AS1Q8NA97 138 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 NEU4Q8WWR8 484 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-209ENST00000580095 MRPS16Q9Y3D3 137 aaKnown RBP8.16□□□□□ -1.1
TOP3A-209ENST00000580095 ZANQ9Y493 2812 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 ATP6V0E1O15342 81 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 TTC9CQ8N5M4 171 aa8.16□□□□□ -1.1
TOP3A-209ENST00000580095 SRSF8Q9BRL6 282 aaKnown RBP8.16□□□□□ -1.1
TOP3A-209ENST00000580095 CUBNO60494 3623 aa8.15□□□□□ -1.1
TOP3A-209ENST00000580095 SNAI2O43623 268 aa8.15□□□□□ -1.1
TOP3A-209ENST00000580095 SMAGPQ0VAQ4 97 aa8.15□□□□□ -1.1
TOP3A-209ENST00000580095 D6R8Y8 96 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 NCR2O95944 276 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 IGHG4P01861 327 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 IFI27P40305 119 aaPredicted RBP8.15□□□□□ -1.11
TOP3A-209ENST00000580095 CSN1S1P47710 185 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 CKS1BP61024 79 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 CCDC144NLQ6NUI1 221 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 CLEC19AQ6UXS0 136 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 PIP4P2Q8N4L2 257 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 Q8N6K4 173 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.11
TOP3A-209ENST00000580095 SOX21Q9Y651 276 aaPredicted RBP8.15□□□□□ -1.11
TOP3A-209ENST00000580095 TMEM189A5PLL7 270 aa8.14□□□□□ -1.11
TOP3A-209ENST00000580095 WFDC3Q8IUB2 231 aa8.14□□□□□ -1.11
TOP3A-209ENST00000580095 KLHDC1Q8N7A1 406 aa8.14□□□□□ -1.11
TOP3A-209ENST00000580095 PRSS3P2Q8NHM4 247 aa8.14□□□□□ -1.11
TOP3A-209ENST00000580095 AJUBAQ96IF1 538 aa8.14□□□□□ -1.11
TOP3A-209ENST00000580095 NDFIP1Q9BT67 221 aa8.14□□□□□ -1.11
TOP3A-209ENST00000580095 SIRPDQ9H106 197 aa8.14□□□□□ -1.11
TOP3A-209ENST00000580095 GTSF1LQ9H1H1 148 aa8.14□□□□□ -1.11
TOP3A-209ENST00000580095 RIGQ13278 110 aa8.14□□□□□ -1.11
TOP3A-209ENST00000580095 GAS8-AS1O95177 125 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 HERV-K104P63124 156 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 FOXE3Q13461 319 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 BRD3OSQ6XYD6 125 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 Q6ZQT7 251 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 HIF1ANQ9NWT6 349 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 THYN1Q9P016 225 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 RABAC1Q9UI14 185 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 FAM231BA6NCW3 169 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 ORM1P02763 201 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 DTX2Q86UW9 622 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 PRR25Q96S07 402 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 AP5S1Q9NUS5 200 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 ABCA2Q9BZC7 2435 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 FAM208BQ5VWN6 2430 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 ACACBO00763 2458 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 RPL7P18124 248 aaKnown RBP8.13□□□□□ -1.11
TOP3A-209ENST00000580095 PSG9Q00887 426 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 FAM162BQ5T6X4 162 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 LYPD1Q8N2G4 141 aa8.13□□□□□ -1.11
TOP3A-209ENST00000580095 CHCHD1Q96BP2 118 aaKnown RBP8.13□□□□□ -1.11
TOP3A-209ENST00000580095 TWIST1Q15672 202 aa8.12□□□□□ -1.11
TOP3A-209ENST00000580095 OR8A1Q8NGG7 326 aa8.12□□□□□ -1.11
TOP3A-209ENST00000580095 IGSF10Q6WRI0 2623 aa8.12□□□□□ -1.11
TOP3A-209ENST00000580095 CREBBPQ92793 2442 aa8.12□□□□□ -1.11
TOP3A-209ENST00000580095 GNLYP22749 145 aa8.12□□□□□ -1.11
TOP3A-209ENST00000580095 FA2HQ7L5A8 372 aa8.12□□□□□ -1.11
TOP3A-209ENST00000580095 TRAV8-6A0A0B4J262 113 aa8.11□□□□□ -1.11
TOP3A-209ENST00000580095 LMO4P61968 165 aa8.11□□□□□ -1.11
TOP3A-209ENST00000580095 CCDC140Q96MF4 163 aa8.11□□□□□ -1.11
TOP3A-209ENST00000580095 MAP1LC3CQ9BXW4 147 aa8.11□□□□□ -1.11
TOP3A-209ENST00000580095 TSPAN13O95857 204 aa8.11□□□□□ -1.11
TOP3A-209ENST00000580095 OR5AL1P0C617 328 aa8.11□□□□□ -1.11
TOP3A-209ENST00000580095 PDE6HQ13956 83 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms